RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 CADM4Q8NFZ8 388 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 OR6B3Q8NGW1 331 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 BAHD1Q8TBE0 780 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 NOC3LQ8WTT2 800 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 WBP2Q969T9 261 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 LRIG1Q96JA1 1093 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 XPO6Q96QU8 1125 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 DPEP3Q9H4B8 488 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 CCSER2Q9H7U1 834 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 KIAA1586Q9HCI6 787 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 CD93Q9NPY3 652 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 COMMD8Q9NX08 183 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 MARK1Q9P0L2 795 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 USP36Q9P275 1121 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 WDR35Q9P2L0 1181 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 CCDC39Q9UFE4 941 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 CHORDC1Q9UHD1 332 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 CEP192Q8TEP8 1941 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 PRRT4C9JH25 899 aa13.08□□□□□ -0.32
TRAPPC9-204ENST00000518723 CLDN5O00501 218 aa13.08□□□□□ -0.32
TRAPPC9-204ENST00000518723 GREM1O60565 184 aa13.08□□□□□ -0.32
TRAPPC9-204ENST00000518723 PRPF6O94906 941 aaKnown RBP13.08□□□□□ -0.32
TRAPPC9-204ENST00000518723 MAOBP27338 520 aa13.08□□□□□ -0.32
TRAPPC9-204ENST00000518723 GJB2P29033 226 aa13.08□□□□□ -0.32
TRAPPC9-204ENST00000518723 SLC5A3P53794 718 aa13.08□□□□□ -0.32
TRAPPC9-204ENST00000518723 RRAGBQ5VZM2 374 aa13.08□□□□□ -0.32
TRAPPC9-204ENST00000518723 IL27RAQ6UWB1 636 aa13.08□□□□□ -0.32
TRAPPC9-204ENST00000518723 DBX2Q6ZNG2 339 aa13.08□□□□□ -0.32
TRAPPC9-204ENST00000518723 GLIS3Q8NEA6 775 aa13.08□□□□□ -0.32
TRAPPC9-204ENST00000518723 SCAMP5Q8TAC9 235 aa13.08□□□□□ -0.32
TRAPPC9-204ENST00000518723 SCFD1Q8WVM8 642 aa13.08□□□□□ -0.32
TRAPPC9-204ENST00000518723 CDC6Q99741 560 aa13.08□□□□□ -0.32
TRAPPC9-204ENST00000518723 SLC6A17Q9H1V8 727 aa13.08□□□□□ -0.32
TRAPPC9-204ENST00000518723 TOR4AQ9NXH8 423 aa13.08□□□□□ -0.32
TRAPPC9-204ENST00000518723 CACNA2D2Q9NY47 1150 aa13.08□□□□□ -0.32
TRAPPC9-204ENST00000518723 WSB2Q9NYS7 404 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC9-204ENST00000518723 PCDHGB2Q9Y5G2 931 aa13.08□□□□□ -0.32
TRAPPC9-204ENST00000518723 RAD54BQ9Y620 910 aa13.08□□□□□ -0.32
TRAPPC9-204ENST00000518723 A0A087WV48 116 aa13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 EIF4E1BA6NMX2 242 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 A8MXQ7 604 aa13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 NEDD8-MDP1E9PL57 170 aa13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 STAU1O95793 577 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 CER1O95813 267 aa13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 CST3P01034 146 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 IRF1P10914 325 aa13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 TYRP14679 529 aa13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 IDEP14735 1019 aa13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 ZNF132P52740 706 aa13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 TNNC1P63316 161 aa13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 WDR72Q3MJ13 1102 aa13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 KIAA1324Q6UXG2 1013 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 FAM35AQ86V20 835 aa13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 SCUBE3Q8IX30 993 aa13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 SETD7Q8WTS6 366 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 TOE1Q96GM8 510 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 KCNK16Q96T55 309 aa13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 BBS2Q9BXC9 721 aa13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 GAREM1Q9H706 876 aa13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 IL21RQ9HBE5 538 aa13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 DMAP1Q9NPF5 467 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 TM7SF3Q9NS93 570 aa13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 HSPBP1Q9NZL4 362 aa13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 GMIPQ9P107 970 aa13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 ATP8B3O60423 1300 aa13.07□□□□□ -0.32
TRAPPC9-204ENST00000518723 CFAP46Q8IYW2 2715 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 MEI4A8MW99 385 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 NPC1O15118 1278 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 FLRT2O43155 660 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 TLR5O60602 858 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 CILPO75339 1184 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 CISD3P0C7P0 127 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 NCAM1P13591 858 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 MATKP42679 507 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 BNC1Q01954 994 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 FUT11Q495W5 492 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 PAQR9Q6ZVX9 377 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 STXBP4Q6ZWJ1 553 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 GALNT15Q8N3T1 639 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 ZCCHC9Q8N567 271 aaKnown RBP13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 CGRRF1Q99675 332 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 KLF16Q9BXK1 252 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 NACA2Q9H009 215 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 XYLT2Q9H1B5 865 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 PRDM16Q9HAZ2 1276 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 ITM2CQ9NQX7 267 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 PANK4Q9NVE7 773 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 FBXO10Q9UK96 956 aa13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 FNDC3AQ9Y2H6 1198 aaKnown RBP13.06□□□□□ -0.32
TRAPPC9-204ENST00000518723 MAST4O15021 2626 aa13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 WASH3PC4AMC7 463 aa13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 BCAT2O15382 392 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 IGLV3-19P01714 112 aa13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 ATXN1LP0C7T5 689 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 DLATP10515 647 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 ATICP31939 592 aa13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 TXLNAP40222 546 aa13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 DGKGP49619 791 aa13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 CAMK2BQ13554 666 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms