RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 STX5Q13190 355 aa12.65□□□□□ -0.39
PCDHGA6-201ENST00000517434 TRIM25Q14258 630 aaKnown RBP12.65□□□□□ -0.39
PCDHGA6-201ENST00000517434 KBTBD12Q3ZCT8 623 aa12.65□□□□□ -0.39
PCDHGA6-201ENST00000517434 SYCP2LQ5T4T6 812 aa12.65□□□□□ -0.39
PCDHGA6-201ENST00000517434 IFNEQ86WN2 208 aa12.65□□□□□ -0.39
PCDHGA6-201ENST00000517434 ENGASEQ8NFI3 743 aa12.65□□□□□ -0.39
PCDHGA6-201ENST00000517434 MMADHCQ9H3L0 296 aaPredicted RBP12.65□□□□□ -0.39
PCDHGA6-201ENST00000517434 NOL6Q9H6R4 1146 aaKnown RBP12.65□□□□□ -0.39
PCDHGA6-201ENST00000517434 RSAD1Q9HA92 442 aa12.65□□□□□ -0.39
PCDHGA6-201ENST00000517434 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.65□□□□□ -0.39
PCDHGA6-201ENST00000517434 C2CD2LO14523 706 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 CYB561D2O14569 222 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 RHOBTB1O94844 696 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 MBL2P11226 248 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 IL12RB1P42701 662 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 RBM43Q6ZSC3 357 aaKnown RBP12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 DDIASQ8IXT1 998 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 SIX5Q8N196 739 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 WNK4Q96J92 1243 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 FBXO44Q9H4M3 255 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 ASB7Q9H672 318 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 TAGLN3Q9UI15 199 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 R3HDM2Q9Y2K5 976 aaKnown RBP12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 F5H5T6 163 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 TRIM24O15164 1050 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 ITGB3P05106 788 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 ATP6V1E1P36543 226 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 KCNA1Q09470 495 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 PDAP1Q13442 181 aaKnown RBP12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 PAN2Q504Q3 1202 aaKnown RBP12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 SLC27A1Q6PCB7 646 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 KCNB2Q92953 911 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 GLMNQ92990 594 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 TMEM165Q9HC07 324 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 CYLDQ9NQC7 956 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 EVA1BQ9NVM1 165 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 EURLQ9NYK6 297 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 TMCO1Q9UM00 188 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 NRCAMQ92823 1304 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 HMBSP08397 361 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 THRAP10827 490 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 RGS4P49798 205 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 DPYDQ12882 1025 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 MAPK7Q13164 816 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 CCDC149Q6ZUS6 474 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 NECAB2Q7Z6G3 386 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 TMPRSS6Q8IU80 811 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 CCDC60Q8IWA6 550 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 MKL1Q969V6 931 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 GINS4Q9BRT9 223 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 SPATA16Q9BXB7 569 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 ZNF518BQ9C0D4 1074 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 SLC25A13Q9UJS0 675 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 ITGA11Q9UKX5 1188 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 CDYLQ9Y232 598 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 PCDHB5Q9Y5E4 795 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 UMODL1Q5DID0 1318 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 TTLL13PA6NNM8 815 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 ZSCAN9O15535 394 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 WEE2P0C1S8 567 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 GPD1P21695 349 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 AKT1P31749 480 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 PPM1AP35813 382 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 FNTAP49354 379 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 ITGA8P53708 1063 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 BCAT1P54687 386 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 OVGP1Q12889 678 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 GOLGA7BQ2TAP0 167 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 MTDHQ86UE4 582 aaKnown RBP12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 NUP93Q8N1F7 819 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 FRMD8Q9BZ67 464 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 CEP44Q9C0F1 390 aa12.64□□□□□ -0.39
PCDHGA6-201ENST00000517434 SOX6P35712 828 aa12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 RGS7P49802 495 aa12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 NUDT2P50583 147 aa12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 MTTPP55157 894 aa12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 NSUN2Q08J23 767 aaKnown RBP eCLIP12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 CCDC81Q6ZN84 652 aa12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 CLVS1Q8IUQ0 354 aaPredicted RBP12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 RNF217Q8TC41 542 aa12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 EPS8L3Q8TE67 593 aaKnown RBP12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 SYN2Q92777 582 aaPredicted RBP12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 EZH1Q92800 747 aaPredicted RBP12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 RMND5BQ96G75 393 aaPredicted RBP12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 CGRRF1Q99675 332 aa12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 SH2D3AQ9BRG2 576 aa12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 CYP39A1Q9NYL5 469 aa12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 HACD3Q9P035 362 aa12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 ZC3H7BQ9UGR2 993 aaKnown RBP12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 SOX13Q9UN79 622 aa12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 RWDD3Q9Y3V2 267 aa12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 UBA6A0AVT1 1052 aaPredicted RBP12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 SYNCRIPO60506 623 aaKnown RBP12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 KLRC2P26717 231 aa12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 CASP7P55210 303 aa12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 EIF3EP60228 445 aaKnown RBP12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 ITGB3BPQ13352 177 aaPredicted RBP12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 CHI3L2Q15782 390 aa12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 ZPBP2Q6X784 338 aa12.63□□□□□ -0.39
PCDHGA6-201ENST00000517434 WDR49Q8IV35 697 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms