RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 TM9SF1O15321 606 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 BANF1O75531 89 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 KRT34O76011 436 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 FAM200BP0CF97 657 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 CHRNB2P17787 502 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 FOXN2P32314 431 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 CHI3L2Q15782 390 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 EFHC1Q5JVL4 640 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 IL31Q6EBC2 164 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 OTOAQ7RTW8 1153 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 LRRC6Q86X45 466 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 E2F7Q96AV8 911 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 ZNF669Q96BR6 464 aaPredicted RBP11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 ZBTB45Q96K62 511 aaPredicted RBP11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 TRIM62Q9BVG3 475 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 FHDC1Q9C0D6 1143 aaPredicted RBP11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 TRPV6Q9H1D0 765 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 PIDD1Q9HB75 910 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 ZFYVE28Q9HCC9 887 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 C20orf96Q9NUD7 363 aaPredicted RBP11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 H3BRB1 525 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 ZC3H11AO75152 810 aaKnown RBP eCLIP11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 E2F6O75461 281 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 KRT36O76013 467 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 DSG1Q02413 1049 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 ACVR2BQ13705 512 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 CAPRIN1Q14444 709 aaKnown RBP11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 PDK1Q15118 436 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 ATP13A4Q4VNC1 1196 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 UBAP2Q5T6F2 1119 aaKnown RBP11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 FAM131BQ86XD5 332 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 KATNAL2Q8IYT4 538 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 ELMOD1Q8N336 334 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 MBOAT7Q96N66 472 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 CAMKK2Q96RR4 588 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 TXLNGYQ9BZA5 131 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 GLIS2Q9BZE0 524 aaPredicted RBP11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 TUT1Q9H6E5 874 aaKnown RBP11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 TASP1Q9H6P5 420 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 SLC38A7Q9NVC3 462 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 ARMCX1Q9P291 453 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 UBQLN1Q9UMX0 589 aaKnown RBP11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 A0A1W2PPM1 405 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 PMPCBO75439 489 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 AP1G2O75843 785 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 SNRPAP09012 282 aaKnown RBP11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 ETFBP38117 255 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 THPOP40225 353 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 GCNT1Q02742 428 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 TTC30AQ86WT1 665 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 ASAP3Q8TDY4 903 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 FAM84AQ96KN4 292 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 OSMRQ99650 979 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 PCDH9Q9HC56 1237 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 DMAC2Q9NW81 257 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 C2CD2Q9Y426 696 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 FCHO1O14526 889 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 GAS2O43903 313 aaKnown RBP11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 DNAJC6O75061 913 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 ZNF286BP0CG31 522 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 INSRRP14616 1297 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 ATXN3P54252 364 aaPredicted RBP11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 TAS2R40P59535 323 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 MCL1Q07820 350 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 MED21Q13503 144 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 LBRQ14739 615 aaKnown RBP11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 EFTUD2Q15029 972 aaKnown RBP eCLIP11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 IZUMO2Q6UXV1 221 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 SCUBE1Q8IWY4 988 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 ABRAQ8N0Z2 381 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 SNX19Q92543 992 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 SGF29Q96ES7 293 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 ADAM7Q9H2U9 754 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 C10orf88Q9H8K7 445 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 LGALS13Q9UHV8 139 aa11.21□□□□□ -0.62
PCDHGA1-202ENST00000517417 ZMYM2Q9UBW7 1377 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 C2CD2LO14523 706 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 PSMG1O95456 288 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 PYGBP11216 843 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 NFKBIAP25963 317 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 SOX11P35716 441 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 PTGER2P43116 358 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 ACADSBP45954 432 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 LAMTOR4Q0VGL1 99 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 MAP1SQ66K74 1059 aaPredicted RBP11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 METTL7BQ6UX53 244 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 CXorf38Q8TB03 319 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 UPF1Q92900 1129 aaKnown RBP eCLIP11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 P2RX7Q99572 595 aaKnown RBP11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 SETD4Q9NVD3 440 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 CPA4Q9UI42 421 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 NOCTQ9UK39 431 aaKnown RBP11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 KCNH4Q9UQ05 1017 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 CHKBQ9Y259 395 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 NRAPQ86VF7 1730 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 KCNA2P16389 499 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 TTC39BQ5VTQ0 682 aaPredicted RBP11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 MIB1Q86YT6 1006 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 PPHLN1Q8NEY8 458 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms