RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 GPR17Q13304 367 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CLUL1Q15846 466 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 EXOC3L4Q17RC7 722 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ELOA3BQ3SY89 546 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 FILIP1LQ4L180 1135 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SLC39A12Q504Y0 691 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 FKBP15Q5T1M5 1219 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 RNF187Q5TA31 235 aaPredicted RBP6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 LIN9Q5TKA1 542 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CDKAL1Q5VV42 579 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SLC8B1Q6J4K2 584 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 LILRA6Q6PI73 481 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 GBP6Q6ZN66 633 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 RRAGAQ7L523 313 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 LUZP1Q86V48 1076 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 LRRTM3Q86VH5 581 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 IL22RA1Q8N6P7 574 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 C12orf76Q8N812 135 aaPredicted RBP6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 KREMEN2Q8NCW0 462 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 RNF214Q8ND24 703 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ELOA3Q8NG57 546 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SPATA18Q8TC71 538 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 NUDT8Q8WV74 236 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 KBTBD7Q8WVZ9 684 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 PABPC5Q96DU9 382 aaKnown RBP6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 MDFIQ99750 246 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 RTP3Q9BQQ7 232 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SYT15Q9BQS2 421 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 DNAI2Q9GZS0 605 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ZCWPW1Q9H0M4 648 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SDCBP2Q9H190 292 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CYP3A43Q9HB55 503 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 PIDD1Q9HB75 910 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CYP4F11Q9HBI6 524 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 UBE2TQ9NPD8 197 aaPredicted RBP6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 PRDM6Q9NQX0 595 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 LIMA1Q9UHB6 759 aaKnown RBP6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 AFF4Q9UHB7 1163 aaKnown RBP6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 GTF3C4Q9UKN8 822 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CDH9Q9ULB4 789 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 BARX2Q9UMQ3 279 aaPredicted RBP6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 NLRC5Q86WI3 1866 aa6.17□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SCN1AP35498 2009 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 KIAA1671Q9BY89 1806 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 RALGAPA2Q2PPJ7 1873 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CCDC195A0A1B0GUA6 201 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 FSD2A1L4K1 749 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 LRRC10BA6NIK2 292 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 GABRDO14764 452 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ATP2C2O75185 946 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 RFPL2O75678 378 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ABLIM3O94929 683 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SEC24AO95486 1093 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 GLP2RO95838 553 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 C1RP00736 705 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 C8AP07357 584 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ATP1A3P13637 1013 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ATF2P15336 505 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ZNF18P17022 549 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 PTPN1P18031 435 aaKnown RBP6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TRIM21P19474 475 aaKnown RBP6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ALAS2P22557 587 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TBXAS1P24557 533 aaPredicted RBP6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 PON1P27169 355 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 LTBRP36941 435 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 USP8P40818 1118 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ASPAP45381 313 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TUFMP49411 452 aaKnown RBP6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ARL4DP49703 201 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 NDST1P52848 882 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ZNF445P59923 1031 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 PSMC1P62191 440 aaKnown RBP6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 YWHAEP62258 255 aaKnown RBP6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CYP27A1Q02318 531 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 UBXN1Q04323 297 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 KCNMA1Q12791 1236 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CUL2Q13617 745 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 GAS6Q14393 721 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 NFE2Q16621 373 aaPredicted RBP6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ARHGAP44Q17R89 818 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 UVSSAQ2YD98 709 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 MGAT5BQ3V5L5 792 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 MIIPQ5JXC2 388 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 PPM1LQ5SGD2 360 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ATAT1Q5SQI0 421 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 RARS2Q5T160 578 aaKnown RBP6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TPGS2Q68CL5 300 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CES5AQ6NT32 575 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ANKRD54Q6NXT1 300 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TMEM184AQ6ZMB5 413 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CCDC149Q6ZUS6 474 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 LIMS2Q7Z4I7 341 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ACOT1Q86TX2 421 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SPATA2LQ8IUW3 424 aaPredicted RBP6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 PPM1KQ8N3J5 372 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ATAD1Q8NBU5 361 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 VN1R2Q8NFZ6 395 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 LMO3Q8TAP4 145 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 MYCBPAPQ8TBZ2 947 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms