RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 NT5C3BQ969T7 300 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 HERPUD2Q9BSE4 406 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ZBED2Q9BTP6 218 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 HERC2P3Q9BVR0 1158 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 VN1R3Q9BXE9 311 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CALN1Q9BXU9 219 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 RAB6CQ9H0N0 254 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 RAB17Q9H0T7 212 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 LRRC19Q9H756 370 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 AAASQ9NRG9 546 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CHST7Q9NS84 486 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 RRN3Q9NYV6 651 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 SPG21Q9NZD8 308 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 MTRRQ9UBK8 725 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PCYOX1Q9UHG3 505 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 RASAL2Q9UJF2 1139 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 NAALADL1Q9UQQ1 740 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 EFR3BQ9Y2G0 817 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PCDHB12Q9Y5F1 795 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 BACE2Q9Y5Z0 518 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CDY1Q9Y6F8 540 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 USP3Q9Y6I4 520 aa7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 COL4A4P53420 1690 aaPredicted RBP7.97□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PLXNA4Q9HCM2 1894 aa7.96□□□□□ -1.13
SCARNA20.1-201ENST00000516009 FAM187AA6NFU0 413 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 C3orf70A6NLC5 250 aaPredicted RBP7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 TNFRSF10BO14763 440 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 TTI1O43156 1089 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ENDOD1O94919 500 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 GJB5O95377 273 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 URODP06132 367 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 FYNP06241 537 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 CD48P09326 243 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 NCAM1P13591 858 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 TNFRSF8P28908 595 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 RDXP35241 583 aaKnown RBP7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 SLC5A3P53794 718 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 YWHAGP61981 247 aaKnown RBP eCLIP7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 RPL10AP62906 217 aaKnown RBP7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 HTRA4P83105 476 aaPredicted RBP7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ROR1Q01973 937 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 DSG1Q02413 1049 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 GUCY2DQ02846 1103 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 DEUP1Q05D60 604 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 NME3Q13232 169 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 SNX1Q13596 522 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 TFDP2Q14188 446 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 CCNG2Q16589 344 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 DDR2Q16832 855 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 MGAT5BQ3V5L5 792 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ERMARDQ5T6L9 678 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 OTUD1Q5VV17 481 aaPredicted RBP7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 SYPL2Q5VXT5 272 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 BSPRYQ5W0U4 402 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 SLC8B1Q6J4K2 584 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 TTC27Q6P3X3 843 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 RSPO2Q6UXX9 243 aaPredicted RBP7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 RNF19BQ6ZMZ0 732 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 CYP4V2Q6ZWL3 525 aaPredicted RBP7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 SND1Q7KZF4 910 aaKnown RBP eCLIP7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 BEND5Q7L4P6 421 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 BHLHA9Q7RTU4 235 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ANKS1BQ7Z6G8 1248 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 DDX53Q86TM3 631 aaKnown RBP7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 RFX6Q8HWS3 928 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 PSTKQ8IV42 348 aaKnown RBP7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 CCDC105Q8IYK2 499 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ARHGAP18Q8N392 663 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 FIBCD1Q8N539 461 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ATAD1Q8NBU5 361 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 SCAMP5Q8TAC9 235 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 SLC7A14Q8TBB6 771 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 GRK7Q8WTQ7 553 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 HNRNPLLQ8WVV9 542 aaKnown RBP7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 C1orf54Q8WWF1 131 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 SEPT5Q99719 369 aaPredicted RBP7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 HINFPQ9BQA5 517 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 HTATIP2Q9BUP3 242 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 SNRNP25Q9BV90 132 aaKnown RBP7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 MAK16Q9BXY0 300 aaKnown RBP7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ADAM33Q9BZ11 813 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 DCLK3Q9C098 648 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 FBXO44Q9H4M3 255 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 PLEKHA4Q9H4M7 779 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 DHX35Q9H5Z1 703 aaKnown RBP7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 FAM204AQ9H8W3 233 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 EPB41L5Q9HCM4 733 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ARFGAP3Q9NP61 516 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 GDF3Q9NR23 364 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ABCC13Q9NSE7 274 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 GPATCH2LQ9NWQ4 482 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 PCDH10Q9P2E7 1040 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 FEZ2Q9UHY8 353 aaPredicted RBP7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 AP4E1Q9UPM8 1137 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 SLC27A5Q9Y2P5 690 aa7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 UTP11Q9Y3A2 253 aaKnown RBP7.96□□□□□ -1.14
SCARNA20.1-201ENST00000516009 SYNJ2BP-COX16A0A087WUM0 186 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 WDR27A2RRH5 827 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ZSCAN5CA6NGD5 496 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms