RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 CACTINQ8WUQ7 758 aaKnown RBP11.16□□□□□ -0.62
CLDND1-231ENST00000515620 SNX19Q92543 992 aa11.16□□□□□ -0.62
CLDND1-231ENST00000515620 WBP2Q969T9 261 aa11.16□□□□□ -0.62
CLDND1-231ENST00000515620 SAAL1Q96ER3 474 aa11.16□□□□□ -0.62
CLDND1-231ENST00000515620 C8orf48Q96LL4 319 aa11.16□□□□□ -0.62
CLDND1-231ENST00000515620 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.16□□□□□ -0.62
CLDND1-231ENST00000515620 WSB2Q9NYS7 404 aaPredicted RBP11.16□□□□□ -0.62
CLDND1-231ENST00000515620 RBAKQ9NYW8 714 aaPredicted RBP11.16□□□□□ -0.62
CLDND1-231ENST00000515620 USP36Q9P275 1121 aaKnown RBP11.16□□□□□ -0.62
CLDND1-231ENST00000515620 EIF2B4Q9UI10 523 aaKnown RBP11.16□□□□□ -0.62
CLDND1-231ENST00000515620 SIX4Q9UIU6 781 aa11.16□□□□□ -0.62
CLDND1-231ENST00000515620 PTPRQQ9UMZ3 2332 aa11.16□□□□□ -0.62
CLDND1-231ENST00000515620 KCNJ18B7U540 433 aa11.15□□□□□ -0.62
CLDND1-231ENST00000515620 RRP8O43159 456 aaKnown RBP11.15□□□□□ -0.62
CLDND1-231ENST00000515620 CACNG3O60359 315 aa11.15□□□□□ -0.62
CLDND1-231ENST00000515620 TMEM191BP0C7N4 346 aa11.15□□□□□ -0.62
CLDND1-231ENST00000515620 DDIT3P35638 169 aa11.15□□□□□ -0.62
CLDND1-231ENST00000515620 GRK6P43250 576 aa11.15□□□□□ -0.62
CLDND1-231ENST00000515620 CSNK1EP49674 416 aaKnown RBP11.15□□□□□ -0.62
CLDND1-231ENST00000515620 NEK4P51957 841 aa11.15□□□□□ -0.62
CLDND1-231ENST00000515620 CLDN6P56747 220 aa11.15□□□□□ -0.62
CLDND1-231ENST00000515620 STARD3Q14849 445 aa11.15□□□□□ -0.62
CLDND1-231ENST00000515620 FUT11Q495W5 492 aa11.15□□□□□ -0.62
CLDND1-231ENST00000515620 HS2ST1Q7LGA3 356 aa11.15□□□□□ -0.62
CLDND1-231ENST00000515620 CACUL1Q86Y37 369 aa11.15□□□□□ -0.62
CLDND1-231ENST00000515620 MYCBPAPQ8TBZ2 947 aa11.15□□□□□ -0.62
CLDND1-231ENST00000515620 NOC3LQ8WTT2 800 aaKnown RBP11.15□□□□□ -0.62
CLDND1-231ENST00000515620 FBXO32Q969P5 355 aa11.15□□□□□ -0.62
CLDND1-231ENST00000515620 BBS2Q9BXC9 721 aa11.15□□□□□ -0.62
CLDND1-231ENST00000515620 TRIM9Q9C026 710 aa11.15□□□□□ -0.62
CLDND1-231ENST00000515620 CCSER2Q9H7U1 834 aa11.15□□□□□ -0.62
CLDND1-231ENST00000515620 TMEM30AQ9NV96 361 aa11.15□□□□□ -0.62
CLDND1-231ENST00000515620 GMIPQ9P107 970 aa11.15□□□□□ -0.62
CLDND1-231ENST00000515620 SLCO1B1Q9Y6L6 691 aa11.15□□□□□ -0.62
CLDND1-231ENST00000515620 PYCARD-AS1I3L0S3 204 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 TYRP14679 529 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 WARSP23381 471 aaKnown RBP11.14□□□□□ -0.63
CLDND1-231ENST00000515620 YWHAQP27348 245 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 TPMTP51580 245 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 MCM6Q14566 821 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 POSTNQ15063 836 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 KIF19Q2TAC6 998 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 HECTD3Q5T447 861 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 C6orf118Q5T5N4 469 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 TPGS1Q6ZTW0 290 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 GPR155Q7Z3F1 870 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 TMPRSS12Q86WS5 348 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 FAM184AQ8NB25 1140 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 PDZD8Q8NEN9 1154 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 ENGASEQ8NFI3 743 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 BHMTQ93088 406 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 HPDLQ96IR7 371 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 XPO6Q96QU8 1125 aaKnown RBP11.14□□□□□ -0.63
CLDND1-231ENST00000515620 ZNF518BQ9C0D4 1074 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 MKRN2Q9H000 416 aaKnown RBP11.14□□□□□ -0.63
CLDND1-231ENST00000515620 NACA2Q9H009 215 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 PDE11AQ9HCR9 933 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 BLOC1S4Q9NUP1 217 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 FTSJ1Q9UET6 329 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 R3HCC1Q9Y3T6 440 aaKnown RBP11.14□□□□□ -0.63
CLDND1-231ENST00000515620 SNX11Q9Y5W9 270 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 AK5Q9Y6K8 562 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 STON1Q9Y6Q2 735 aa11.14□□□□□ -0.63
CLDND1-231ENST00000515620 TEX51A0A1B0GUA7 166 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 GOLGA8IPA6NC78 632 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 GOLGA8JA6NMD2 632 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 METTL12A8MUP2 240 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 GFRA2O00451 464 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 CLDN5O00501 218 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 OXTRP30559 389 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 HNF1BP35680 557 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 DGKGP49619 791 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 VASPP50552 380 aaPredicted RBP11.13□□□□□ -0.63
CLDND1-231ENST00000515620 CCT8P50990 548 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 AFF3P51826 1226 aaKnown RBP11.13□□□□□ -0.63
CLDND1-231ENST00000515620 IL9RQ01113 521 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 KCNA1Q09470 495 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 SF3A1Q15459 793 aaKnown RBP11.13□□□□□ -0.63
CLDND1-231ENST00000515620 PCSK4Q6UW60 755 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 LAYNQ6UX15 382 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 DPH6Q7L8W6 267 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 LIMS2Q7Z4I7 341 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 METTL3Q86U44 580 aaKnown RBP11.13□□□□□ -0.63
CLDND1-231ENST00000515620 FAM124AQ86V42 546 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 SFR1Q86XK3 245 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 RASSF8Q8NHQ8 419 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 C1orf216Q8TAB5 229 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 BAP1Q92560 729 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 HVCN1Q96D96 273 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 CALML4Q96GE6 196 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 MMS19Q96T76 1030 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 LLPHQ9BRT6 129 aaKnown RBP11.13□□□□□ -0.63
CLDND1-231ENST00000515620 ELOVL4Q9GZR5 314 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 ST6GALNAC4Q9H4F1 302 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 ITM2CQ9NQX7 267 aa11.13□□□□□ -0.63
CLDND1-231ENST00000515620 PTPRJQ12913 1337 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 KCNK3O14649 394 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 ARHGAP6O43182 974 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 RTN3O95197 1032 aaPredicted RBP11.12□□□□□ -0.63
CLDND1-231ENST00000515620 JUPP14923 745 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms