RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 BPIFB1Q8TDL5 484 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 USP13Q92995 863 aaPredicted RBP12.48□□□□□ -0.41
SNF8-215ENST00000515572 C18orf8Q96DM3 657 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 SLC22A12Q96S37 553 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 KXD1Q9BQD3 176 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 SYT11Q9BT88 431 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 HAUS4Q9H6D7 363 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 SEPT11Q9NVA2 429 aaKnown RBP12.48□□□□□ -0.41
SNF8-215ENST00000515572 ASNSD1Q9NWL6 643 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 THG1LQ9NWX6 298 aaKnown RBP12.48□□□□□ -0.41
SNF8-215ENST00000515572 OSER1Q9NX31 292 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 DNMT3LQ9UJW3 386 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 UNC80Q8N2C7 3258 aa12.48□□□□□ -0.41
SNF8-215ENST00000515572 HEPACAM2A8MVW5 462 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 ERBB2P04626 1255 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 ASGR2P07307 311 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 SRFP11831 508 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 MMP8P22894 467 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 SCNN1AP37088 669 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 GABRB2P47870 512 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 YWHAZP63104 245 aaKnown RBP12.47□□□□□ -0.41
SNF8-215ENST00000515572 GOLGA8FQ08AF8 430 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 GOLGA8DPQ0D2H9 430 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 FCHO2Q0JRZ9 810 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 TBX2Q13207 712 aaPredicted RBP12.47□□□□□ -0.41
SNF8-215ENST00000515572 CLEC16AQ2KHT3 1053 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 C10orf120Q5SQS8 335 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 VITQ6UXI7 678 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 TMC6Q7Z403 805 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 PHF13Q86YI8 300 aaPredicted RBP12.47□□□□□ -0.41
SNF8-215ENST00000515572 YAF2Q8IY57 180 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 UBALD2Q8IYN6 164 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 CLEC4CQ8WTT0 213 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 RNF139Q8WU17 664 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 RSAD2Q8WXG1 361 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 CPA5Q8WXQ8 436 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 NDRG1Q92597 394 aaKnown RBP12.47□□□□□ -0.41
SNF8-215ENST00000515572 FAM149B1Q96BN6 582 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 DNAJC7Q99615 494 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 TRMT61BQ9BVS5 477 aaKnown RBP12.47□□□□□ -0.41
SNF8-215ENST00000515572 SMG9Q9H0W8 520 aaKnown RBP12.47□□□□□ -0.41
SNF8-215ENST00000515572 ZNHIT6Q9NWK9 470 aaKnown RBP12.47□□□□□ -0.41
SNF8-215ENST00000515572 STRIP2Q9ULQ0 834 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 DUSP12Q9UNI6 340 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 CPQQ9Y646 472 aa12.47□□□□□ -0.41
SNF8-215ENST00000515572 AKR1B15C9JRZ8 316 aaPredicted RBP12.46□□□□□ -0.41
SNF8-215ENST00000515572 HSF2BPO75031 334 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 MFAP3LO75121 409 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 CALB1P05937 261 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 SKILP12757 684 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 ALADP13716 330 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 SLC6A3Q01959 620 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 USP4Q13107 963 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 ZNF77Q15935 545 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 ARHGAP29Q52LW3 1261 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 TDRD12Q587J7 1177 aaKnown RBP12.46□□□□□ -0.41
SNF8-215ENST00000515572 HGSNATQ68CP4 663 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 OR6B2Q6IFH4 312 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 ACAD10Q6JQN1 1059 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 MSANTD2Q6P1R3 559 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 OLFML1Q6UWY5 402 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 FAM183BPQ6ZVS7 135 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 SLC26A9Q7LBE3 791 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 ZNF571Q7Z3V5 609 aaPredicted RBP12.46□□□□□ -0.41
SNF8-215ENST00000515572 SH3RF2Q8TEC5 729 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 RSPRY1Q96DX4 576 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 PCDHB18PQ96TA0 734 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 RPP25Q9BUL9 199 aaKnown RBP12.46□□□□□ -0.41
SNF8-215ENST00000515572 PLA2G2FQ9BZM2 168 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 POPDC2Q9HBU9 364 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 SLC2A4RGQ9NR83 387 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 ABHD10Q9NUJ1 306 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 MARCH2Q9P0N8 246 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 WDR35Q9P2L0 1181 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 TJP2Q9UDY2 1190 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 MUTYHQ9UIF7 546 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 CCL26Q9Y258 94 aa12.46□□□□□ -0.41
SNF8-215ENST00000515572 E2F8A0AVK6 867 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 LEFTY2O00292 366 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 CAPN9O14815 690 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 ZNF263O14978 683 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 CHADO15335 359 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 DCXO43602 365 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 TBX18O95935 607 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 GZMAP12544 262 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 NCAM1P13591 858 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 CDC25BP30305 580 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 KPNA1P52294 538 aaPredicted RBP12.45□□□□□ -0.42
SNF8-215ENST00000515572 GSCP56915 257 aaPredicted RBP12.45□□□□□ -0.42
SNF8-215ENST00000515572 COG7P83436 770 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 CDK17Q00537 523 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 PFKPQ01813 784 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 C1QBPQ07021 282 aaKnown RBP12.45□□□□□ -0.42
SNF8-215ENST00000515572 MTF1Q14872 753 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 CC2D1AQ6P1N0 951 aaPredicted RBP12.45□□□□□ -0.42
SNF8-215ENST00000515572 MMS22LQ6ZRQ5 1243 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 HFE2Q6ZVN8 426 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.45□□□□□ -0.42
SNF8-215ENST00000515572 MIB1Q86YT6 1006 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 ST13P5Q8NFI4 369 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms