RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 MAML2Q8IZL2 1156 aaPredicted RBP13.43□□□□□ -0.26
CLCN3-210ENST00000515420 ADGRG2Q8IZP9 1017 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 SPEM1Q8N4L4 309 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 TTC16Q8NEE8 873 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 CCDC26Q8TAB7 109 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 TTC8Q8TAM2 541 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 SHC3Q92529 594 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 HSFY1Q96LI6 401 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 P2RY13Q9BPV8 354 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 ZSWIM1Q9BR11 485 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 KLF16Q9BXK1 252 aaPredicted RBP13.43□□□□□ -0.26
CLCN3-210ENST00000515420 FAM126AQ9BYI3 521 aaPredicted RBP13.43□□□□□ -0.26
CLCN3-210ENST00000515420 LINC00597Q9H2U6 94 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 SEMA4AQ9H3S1 761 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 SAMSN1Q9NSI8 373 aaKnown RBP13.43□□□□□ -0.26
CLCN3-210ENST00000515420 OLA1Q9NTK5 396 aaKnown RBP13.43□□□□□ -0.26
CLCN3-210ENST00000515420 KIAA1549LQ6ZVL6 1849 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 M0QYV0 167 aa13.42□□□□□ -0.26
CLCN3-210ENST00000515420 TULP2O00295 520 aa13.42□□□□□ -0.26
CLCN3-210ENST00000515420 CYP17A1P05093 508 aa13.42□□□□□ -0.26
CLCN3-210ENST00000515420 SP9P0CG40 484 aa13.42□□□□□ -0.26
CLCN3-210ENST00000515420 KRT5P13647 590 aa13.42□□□□□ -0.26
CLCN3-210ENST00000515420 BRD2P25440 801 aaKnown RBP13.42□□□□□ -0.26
CLCN3-210ENST00000515420 YWHAGP61981 247 aaKnown RBP eCLIP13.42□□□□□ -0.26
CLCN3-210ENST00000515420 COG7P83436 770 aa13.42□□□□□ -0.26
CLCN3-210ENST00000515420 ADIGQ0VDE8 80 aa13.42□□□□□ -0.26
CLCN3-210ENST00000515420 DHCR24Q15392 516 aa13.42□□□□□ -0.26
CLCN3-210ENST00000515420 C10orf120Q5SQS8 335 aa13.42□□□□□ -0.26
CLCN3-210ENST00000515420 SIX6OS1Q8N1H7 587 aa13.42□□□□□ -0.26
CLCN3-210ENST00000515420 STK32AQ8WU08 396 aa13.42□□□□□ -0.26
CLCN3-210ENST00000515420 IRGQQ8WZA9 623 aa13.42□□□□□ -0.26
CLCN3-210ENST00000515420 CD101Q93033 1021 aa13.42□□□□□ -0.26
CLCN3-210ENST00000515420 ULBP1Q9BZM6 244 aa13.42□□□□□ -0.26
CLCN3-210ENST00000515420 SIX2Q9NPC8 291 aa13.42□□□□□ -0.26
CLCN3-210ENST00000515420 LSM7Q9UK45 103 aaKnown RBP13.42□□□□□ -0.26
CLCN3-210ENST00000515420 VPS13AQ96RL7 3174 aa13.42□□□□□ -0.26
CLCN3-210ENST00000515420 MYOFQ9NZM1 2061 aa13.41□□□□□ -0.26
CLCN3-210ENST00000515420 GREM1O60565 184 aa13.41□□□□□ -0.26
CLCN3-210ENST00000515420 FBXO21O94952 628 aa13.41□□□□□ -0.26
CLCN3-210ENST00000515420 TBX18O95935 607 aa13.41□□□□□ -0.26
CLCN3-210ENST00000515420 TPM2P07951 284 aa13.41□□□□□ -0.26
CLCN3-210ENST00000515420 RPL34P49207 117 aaKnown RBP13.41□□□□□ -0.26
CLCN3-210ENST00000515420 MYL5Q02045 173 aa13.41□□□□□ -0.26
CLCN3-210ENST00000515420 GAB4Q2WGN9 574 aa13.41□□□□□ -0.26
CLCN3-210ENST00000515420 FSTL4Q6MZW2 842 aa13.41□□□□□ -0.26
CLCN3-210ENST00000515420 PMF1Q6P1K2 205 aa13.41□□□□□ -0.26
CLCN3-210ENST00000515420 BHLHA9Q7RTU4 235 aa13.41□□□□□ -0.26
CLCN3-210ENST00000515420 UBA3Q8TBC4 463 aa13.41□□□□□ -0.26
CLCN3-210ENST00000515420 NELL1Q92832 810 aa13.41□□□□□ -0.26
CLCN3-210ENST00000515420 SECISBP2LQ93073 1101 aaKnown RBP13.41□□□□□ -0.26
CLCN3-210ENST00000515420 TMEM63CQ9P1W3 806 aa13.41□□□□□ -0.26
CLCN3-210ENST00000515420 ZNF510Q9Y2H8 683 aa13.41□□□□□ -0.26
CLCN3-210ENST00000515420 DAAM1Q9Y4D1 1078 aa13.41□□□□□ -0.26
CLCN3-210ENST00000515420 BECN2A8MW95 431 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 CHURC1-FNTBB4DL54 471 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 HOXC11O43248 304 aaPredicted RBP13.4□□□□□ -0.26
CLCN3-210ENST00000515420 SART1O43290 800 aaKnown RBP13.4□□□□□ -0.26
CLCN3-210ENST00000515420 ATG13O75143 517 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 ADH5P11766 374 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 GNA15P30679 374 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 OPRD1P41143 372 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 GPD2P43304 727 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 ACADSBP45954 432 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 CXCL12P48061 93 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 GALK1P51570 392 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 NRLP54845 237 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 DAOAP59103 153 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 GAD2Q05329 585 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 GAS6Q14393 721 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 PREPLQ4J6C6 727 aaPredicted RBP13.4□□□□□ -0.26
CLCN3-210ENST00000515420 HSP90AA4PQ58FG1 418 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 BTBD8Q5XKL5 378 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 GJB7Q6PEY0 223 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 RHBDF2Q6PJF5 856 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 Q6ZNB5 142 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 C11orf57Q6ZUT1 292 aaPredicted RBP13.4□□□□□ -0.26
CLCN3-210ENST00000515420 BBS7Q8IWZ6 715 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 ANKRD20A12PQ8NF67 263 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 ZNF606Q8WXB4 792 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 DCLK3Q9C098 648 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 SPHK2Q9NRA0 654 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 ABCC13Q9NSE7 274 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 RBM12Q9NTZ6 932 aaKnown RBP13.4□□□□□ -0.26
CLCN3-210ENST00000515420 FAM86C1Q9NVL1 165 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 DNAJC12Q9UKB3 198 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 STRIP2Q9ULQ0 834 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 PCDHGA2Q9Y5H1 932 aa13.4□□□□□ -0.26
CLCN3-210ENST00000515420 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.39□□□□□ -0.27
CLCN3-210ENST00000515420 PES1O00541 588 aaKnown RBP13.39□□□□□ -0.27
CLCN3-210ENST00000515420 THAP12O43422 761 aa13.39□□□□□ -0.27
CLCN3-210ENST00000515420 STC2O76061 302 aa13.39□□□□□ -0.27
CLCN3-210ENST00000515420 LETM1O95202 739 aaPredicted RBP13.39□□□□□ -0.27
CLCN3-210ENST00000515420 IRF1P10914 325 aa13.39□□□□□ -0.27
CLCN3-210ENST00000515420 TDGF1P13385 188 aa13.39□□□□□ -0.27
CLCN3-210ENST00000515420 PTMSP20962 102 aa13.39□□□□□ -0.27
CLCN3-210ENST00000515420 HOXA6P31267 233 aa13.39□□□□□ -0.27
CLCN3-210ENST00000515420 MRE11P49959 708 aa13.39□□□□□ -0.27
CLCN3-210ENST00000515420 BPIFB4P59827 614 aa13.39□□□□□ -0.27
CLCN3-210ENST00000515420 CSTF1Q05048 431 aaKnown RBP13.39□□□□□ -0.27
CLCN3-210ENST00000515420 PTK2Q05397 1052 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms