RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 CCT6BQ92526 530 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 CENPIQ92674 756 aaPredicted RBP8.53□□□□□ -1.04
CPNE4-211ENST00000514439 FAF2Q96CS3 445 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 RTP4Q96DX8 246 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 SGSM3Q96HU1 749 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 ZFP42Q96MM3 310 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 TGS1Q96RS0 853 aaKnown RBP8.53□□□□□ -1.04
CPNE4-211ENST00000514439 NCAPGQ9BPX3 1015 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 SENP1Q9P0U3 644 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 TRIP12Q14669 1992 aaPredicted RBP8.53□□□□□ -1.04
CPNE4-211ENST00000514439 PDCD11Q14690 1871 aaKnown RBP8.53□□□□□ -1.04
CPNE4-211ENST00000514439 CFAP69A5D8W1 941 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 MYADML2A6NDP7 307 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 MANSC4A6NHS7 340 aaPredicted RBP8.53□□□□□ -1.04
CPNE4-211ENST00000514439 SNX3O60493 162 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 PIAS1O75925 651 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 ZBED1O96006 694 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 OAS1P00973 400 aaKnown RBP8.53□□□□□ -1.04
CPNE4-211ENST00000514439 IGHA2P01877 340 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 GNAT1P11488 350 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 CYP2F1P24903 491 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 RBL1P28749 1068 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 L1CAMP32004 1257 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 ACADSBP45954 432 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 WDR4P57081 412 aaKnown RBP8.53□□□□□ -1.04
CPNE4-211ENST00000514439 ACTN3Q08043 901 aaPredicted RBP8.53□□□□□ -1.04
CPNE4-211ENST00000514439 ZKSCAN8Q15776 578 aaPredicted RBP8.53□□□□□ -1.04
CPNE4-211ENST00000514439 DPYSL2Q16555 572 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 TTC31Q49AM3 519 aaPredicted RBP8.53□□□□□ -1.04
CPNE4-211ENST00000514439 NUGGCQ68CJ6 796 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 ARCQ7LC44 396 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 IGDCC3Q8IVU1 814 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 C4orf33Q8N1A6 199 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 B3GALNT2Q8NCR0 500 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 FBF1Q8TES7 1133 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 TNIP3Q96KP6 325 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 HSFY1Q96LI6 401 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 MAGEB5Q9BZ81 275 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 DHX35Q9H5Z1 703 aaKnown RBP8.53□□□□□ -1.04
CPNE4-211ENST00000514439 ACSS3Q9H6R3 686 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 NRDE2Q9H7Z3 1164 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 CYLDQ9NQC7 956 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 RAB6BQ9NRW1 208 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 PAK5Q9P286 719 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 FETUBQ9UGM5 382 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 AP4E1Q9UPM8 1137 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 CHMP2BQ9UQN3 213 aa8.53□□□□□ -1.04
CPNE4-211ENST00000514439 BCLAF3A2AJT9 711 aaKnown RBP8.52□□□□□ -1.05
CPNE4-211ENST00000514439 CCT8L1PA6NM43 557 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 ZNF487B1APH4 448 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 DNM1LO00429 736 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 PITPNM1O00562 1244 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 XPO1O14980 1071 aaKnown RBP8.52□□□□□ -1.05
CPNE4-211ENST00000514439 CHADO15335 359 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 PRPF4O43172 522 aaKnown RBP eCLIP8.52□□□□□ -1.05
CPNE4-211ENST00000514439 ATP2C2O75185 946 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 WARSP23381 471 aaKnown RBP8.52□□□□□ -1.05
CPNE4-211ENST00000514439 LRPAP1P30533 357 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 ELK3P41970 407 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 KLHL38Q2WGJ6 581 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 FAXCQ5TGI0 409 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 PIGZQ86VD9 579 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 PALM2Q8IXS6 379 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 TOP6BLQ8N6T0 577 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 CCDC185Q8N715 623 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 LRRN4Q8WUT4 740 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 SOCS4Q8WXH5 440 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 MAGEB18Q96M61 343 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 PPP1R10Q96QC0 940 aaKnown RBP8.52□□□□□ -1.05
CPNE4-211ENST00000514439 SMC6Q96SB8 1091 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 PAFAH2Q99487 392 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 DHRS4Q9BTZ2 278 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 ACTR5Q9H9F9 607 aaPredicted RBP8.52□□□□□ -1.05
CPNE4-211ENST00000514439 MTMR10Q9NXD2 777 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 A0A1W2PPM1 405 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 MEIS3P2A8K0S8 358 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 H0YHG0 523 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 CLDN5O00501 218 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 CYB561D2O14569 222 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 TNPO2O14787 897 aaKnown RBP8.52□□□□□ -1.05
CPNE4-211ENST00000514439 ASMTLO95671 621 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 C6orf222P0C671 652 aaPredicted RBP8.52□□□□□ -1.05
CPNE4-211ENST00000514439 AKR1A1P14550 325 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 TSHRP16473 764 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 IGFBP6P24592 240 aaPredicted RBP8.52□□□□□ -1.05
CPNE4-211ENST00000514439 ACAT1P24752 427 aaKnown RBP8.52□□□□□ -1.05
CPNE4-211ENST00000514439 FOXN2P32314 431 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 GBE1Q04446 702 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 ADIGQ0VDE8 80 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 LACTB2Q53H82 288 aaPredicted RBP8.52□□□□□ -1.05
CPNE4-211ENST00000514439 WSCD1Q658N2 575 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 TAF2Q6P1X5 1199 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 ADGRD1Q6QNK2 874 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 FUKQ8N0W3 1084 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 DENND1AQ8TEH3 1009 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 NDRG1Q92597 394 aaKnown RBP8.52□□□□□ -1.05
CPNE4-211ENST00000514439 FAM149B1Q96BN6 582 aa8.52□□□□□ -1.05
CPNE4-211ENST00000514439 KCTD15Q96SI1 283 aaPredicted RBP8.52□□□□□ -1.05
CPNE4-211ENST00000514439 HNRNPABQ99729 332 aaKnown RBP8.52□□□□□ -1.05
CPNE4-211ENST00000514439 DUSP16Q9BY84 665 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms