RNA–Protein interactions for RNA: ENST00000514434.1

DDR1-275, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-275ENST00000514434 TRIM59Q8IWR1 403 aa13.74□□□□□ -0.21
DDR1-275ENST00000514434 CCDC33Q8N5R6 958 aa13.74□□□□□ -0.21
DDR1-275ENST00000514434 TRIML1Q8N9V2 468 aa13.74□□□□□ -0.21
DDR1-275ENST00000514434 LRRC4Q9HBW1 653 aa13.74□□□□□ -0.21
DDR1-275ENST00000514434 CYLDQ9NQC7 956 aa13.74□□□□□ -0.21
DDR1-275ENST00000514434 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.74□□□□□ -0.21
DDR1-275ENST00000514434 HESX1Q9UBX0 185 aa13.74□□□□□ -0.21
DDR1-275ENST00000514434 DNMT3LQ9UJW3 386 aa13.74□□□□□ -0.21
DDR1-275ENST00000514434 CEP250Q9BV73 2442 aa13.74□□□□□ -0.21
DDR1-275ENST00000514434 K7EQS6 105 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 RNF225M0QZC1 329 aaPredicted RBP13.73□□□□□ -0.21
DDR1-275ENST00000514434 FGFR1OPO95684 399 aaKnown RBP13.73□□□□□ -0.21
DDR1-275ENST00000514434 AFPP02771 609 aaKnown RBP13.73□□□□□ -0.21
DDR1-275ENST00000514434 CCDC192P0DO97 292 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 VDRP11473 427 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 BCAT1P54687 386 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 GAD2Q05329 585 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 GOLGA8FQ08AF8 430 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 GOLGA8DPQ0D2H9 430 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 EFEMP1Q12805 493 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 BTBD8Q5XKL5 378 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 FOXR2Q6PJQ5 311 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 TPGS1Q6ZTW0 290 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 CEP68Q76N32 757 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 RSRC2Q7L4I2 434 aaKnown RBP13.73□□□□□ -0.21
DDR1-275ENST00000514434 TMEM25Q86YD3 366 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 UBR7Q8N806 425 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 KIAA1958Q8N8K9 716 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 EHBP1Q8NDI1 1231 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 LMO3Q8TAP4 145 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 TFAP2BQ92481 460 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 PNKPQ96T60 521 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 ULBP1Q9BZM6 244 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 INTS2Q9H0H0 1204 aaKnown RBP13.73□□□□□ -0.21
DDR1-275ENST00000514434 CLSTN2Q9H4D0 955 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 FAM124BQ9H5Z6 455 aaPredicted RBP13.73□□□□□ -0.21
DDR1-275ENST00000514434 ZDHHC4Q9NPG8 344 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 ARHGEF4Q9NR80 690 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 RWDD2AQ9UIY3 292 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 RASAL2Q9UJF2 1139 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 LSM7Q9UK45 103 aaKnown RBP13.73□□□□□ -0.21
DDR1-275ENST00000514434 USP3Q9Y6I4 520 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 ZNF292O60281 2723 aa13.73□□□□□ -0.21
DDR1-275ENST00000514434 MYO18AQ92614 2054 aaKnown RBP13.73□□□□□ -0.21
DDR1-275ENST00000514434 O00370 1275 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 PIK3R2O00459 728 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 PMM2O15305 246 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 P4HA2O15460 535 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 KAT7O95251 611 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 APODP05090 189 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 BRD2P25440 801 aaKnown RBP13.72□□□□□ -0.21
DDR1-275ENST00000514434 PLA2G4AP47712 749 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 PSEN1P49768 467 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 RGS7P49802 495 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 ADIGQ0VDE8 80 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 BST2Q10589 180 aaKnown RBP13.72□□□□□ -0.21
DDR1-275ENST00000514434 DMC1Q14565 340 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 TPD52L1Q16890 204 aaPredicted RBP13.72□□□□□ -0.21
DDR1-275ENST00000514434 EMC10Q5UCC4 262 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 TADA2BQ86TJ2 420 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 RBBP8NLQ8NC74 664 aaPredicted RBP13.72□□□□□ -0.21
DDR1-275ENST00000514434 USP33Q8TEY7 942 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 SECISBP2LQ93073 1101 aaKnown RBP13.72□□□□□ -0.21
DDR1-275ENST00000514434 BHMTQ93088 406 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 ACDQ96AP0 544 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 OTUB2Q96DC9 234 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 CNOT6LQ96LI5 555 aaKnown RBP13.72□□□□□ -0.21
DDR1-275ENST00000514434 IPO9Q96P70 1041 aaKnown RBP13.72□□□□□ -0.21
DDR1-275ENST00000514434 MED15Q96RN5 788 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 CRACR2AQ9BSW2 395 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 UBXN6Q9BZV1 441 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 SPHK2Q9NRA0 654 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 GMEB2Q9UKD1 530 aa13.72□□□□□ -0.21
DDR1-275ENST00000514434 TBC1D3BA6NDS4 549 aa13.71□□□□□ -0.21
DDR1-275ENST00000514434 NEDD8-MDP1E9PL57 170 aa13.71□□□□□ -0.21
DDR1-275ENST00000514434 XPO1O14980 1071 aaKnown RBP13.71□□□□□ -0.21
DDR1-275ENST00000514434 TRIM24O15164 1050 aa13.71□□□□□ -0.21
DDR1-275ENST00000514434 GREM1O60565 184 aa13.71□□□□□ -0.21
DDR1-275ENST00000514434 TULP3O75386 442 aa13.71□□□□□ -0.21
DDR1-275ENST00000514434 ZBED1O96006 694 aa13.71□□□□□ -0.21
DDR1-275ENST00000514434 KRT5P13647 590 aa13.71□□□□□ -0.21
DDR1-275ENST00000514434 LCP1P13796 627 aa13.71□□□□□ -0.21
DDR1-275ENST00000514434 TIE1P35590 1138 aa13.71□□□□□ -0.21
DDR1-275ENST00000514434 MARSP56192 900 aaKnown RBP13.71□□□□□ -0.21
DDR1-275ENST00000514434 YWHAGP61981 247 aaKnown RBP eCLIP13.71□□□□□ -0.21
DDR1-275ENST00000514434 RAB41Q5JT25 222 aa13.71□□□□□ -0.21
DDR1-275ENST00000514434 HTR3DQ70Z44 454 aa13.71□□□□□ -0.21
DDR1-275ENST00000514434 SYT13Q7L8C5 426 aa13.71□□□□□ -0.21
DDR1-275ENST00000514434 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.71□□□□□ -0.21
DDR1-275ENST00000514434 WDR5BQ86VZ2 330 aa13.71□□□□□ -0.21
DDR1-275ENST00000514434 SIX6OS1Q8N1H7 587 aa13.71□□□□□ -0.21
DDR1-275ENST00000514434 ARHGAP18Q8N392 663 aa13.71□□□□□ -0.21
DDR1-275ENST00000514434 KREMEN1Q96MU8 473 aa13.71□□□□□ -0.21
DDR1-275ENST00000514434 ZSWIM1Q9BR11 485 aa13.71□□□□□ -0.21
DDR1-275ENST00000514434 CLIC5Q9NZA1 410 aa13.71□□□□□ -0.21
DDR1-275ENST00000514434 KIAA1257Q9ULG3 409 aa13.71□□□□□ -0.21
DDR1-275ENST00000514434 USP18Q9UMW8 372 aa13.71□□□□□ -0.21
DDR1-275ENST00000514434 SPAG17Q6Q759 2223 aa13.7□□□□□ -0.22
DDR1-275ENST00000514434 SLC12A8A0AV02 714 aa13.7□□□□□ -0.22
DDR1-275ENST00000514434 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms