RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 SYN1P17600 705 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 YWHAQP27348 245 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 RDXP35241 583 aaKnown RBP16.69■□□□□ 0.26
NUP54-214ENST00000514307 CDR1P51861 262 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 SLC5A3P53794 718 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 YWHAGP61981 247 aaKnown RBP eCLIP16.69■□□□□ 0.26
NUP54-214ENST00000514307 DEUP1Q05D60 604 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 DUSP4Q13115 394 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 RAB33AQ14088 237 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 TFDP2Q14188 446 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 KRT81Q14533 505 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 ELF2Q15723 593 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 ATP13A4Q4VNC1 1196 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 TRNP1Q6NT89 227 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 DENND5BQ6ZUT9 1274 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 GPRIN1Q7Z2K8 1008 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 IFT20Q8IY31 132 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 NDRG1Q92597 394 aaKnown RBP16.69■□□□□ 0.26
NUP54-214ENST00000514307 HSPH1Q92598 858 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 PGAP3Q96FM1 320 aaPredicted RBP16.69■□□□□ 0.26
NUP54-214ENST00000514307 LRRC1Q9BTT6 524 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 PARD6BQ9BYG5 372 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 TMEM30AQ9NV96 361 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 IL37Q9NZH6 218 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 NAALADL1Q9UQQ1 740 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 SLC27A5Q9Y2P5 690 aa16.69■□□□□ 0.26
NUP54-214ENST00000514307 FAM187AA6NFU0 413 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 ZNF487B1APH4 448 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 C2CD2LO14523 706 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 MDM4O15151 490 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 PHF2O75151 1096 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 ABLIM3O94929 683 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 BMPR1AP36894 532 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 ALDH1A3P47895 512 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 EPHB4P54760 987 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 HDAC4P56524 1084 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 ROR1Q01973 937 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 DHX34Q14147 1143 aaKnown RBP16.68■□□□□ 0.26
NUP54-214ENST00000514307 NAA30Q147X3 362 aaPredicted RBP16.68■□□□□ 0.26
NUP54-214ENST00000514307 BRD3Q15059 726 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 CCNG2Q16589 344 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 SH3PXD2AQ5TCZ1 1133 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 DAB2IPQ5VWQ8 1189 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 AADACL2Q6P093 401 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 RSPO2Q6UXX9 243 aaPredicted RBP16.68■□□□□ 0.26
NUP54-214ENST00000514307 ADAT2Q7Z6V5 191 aaKnown RBP16.68■□□□□ 0.26
NUP54-214ENST00000514307 SCAMP5Q8TAC9 235 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 SP7Q8TDD2 431 aaPredicted RBP16.68■□□□□ 0.26
NUP54-214ENST00000514307 RAPGEF5Q92565 580 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 SEPT5Q99719 369 aaPredicted RBP16.68■□□□□ 0.26
NUP54-214ENST00000514307 CLSTN3Q9BQT9 956 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 HEMGNQ9BXL5 484 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 LRRC19Q9H756 370 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 RXFP1Q9HBX9 757 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 ZMYND8Q9ULU4 1186 aaPredicted RBP16.68■□□□□ 0.26
NUP54-214ENST00000514307 LZTS1Q9Y250 596 aa16.68■□□□□ 0.26
NUP54-214ENST00000514307 SCN5AQ14524 2016 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 DNAH12Q6ZR08 3092 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 ALPK3Q96L96 1907 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 PI4K2BG5E9Z4 385 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 LPXNO60711 386 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 CXCL14O95715 111 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 ATF2P15336 505 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 TCF4P15884 667 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 ZFXP17010 805 aaPredicted RBP16.67■□□□□ 0.26
NUP54-214ENST00000514307 IL1R2P27930 398 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 CDKN2BP42772 138 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 ZNF135P52742 658 aaPredicted RBP16.67■□□□□ 0.26
NUP54-214ENST00000514307 CDH6P55285 790 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 TAF12Q16514 161 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 TAZQ16635 292 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 CYP1B1Q16678 543 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 KCNT1Q5JUK3 1230 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 SYPL2Q5VXT5 272 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 WDR93Q6P2C0 686 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 MFSD7Q6UXD7 560 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 SYDE1Q6ZW31 735 aaPredicted RBP16.67■□□□□ 0.26
NUP54-214ENST00000514307 ATL2Q8NHH9 583 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 SLC7A14Q8TBB6 771 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 GRK7Q8WTQ7 553 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 VN1R3Q9BXE9 311 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 CALN1Q9BXU9 219 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 TLR8Q9NR97 1041 aaKnown RBP16.67■□□□□ 0.26
NUP54-214ENST00000514307 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.67■□□□□ 0.26
NUP54-214ENST00000514307 CXXC1Q9P0U4 656 aaPredicted RBP16.67■□□□□ 0.26
NUP54-214ENST00000514307 RASAL2Q9UJF2 1139 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 MYH10P35580 1976 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 TET1Q8NFU7 2136 aa16.67■□□□□ 0.26
NUP54-214ENST00000514307 hCG_1818297A0A087WSY0 165 aa16.66■□□□□ 0.26
NUP54-214ENST00000514307 FYNP06241 537 aa16.66■□□□□ 0.26
NUP54-214ENST00000514307 RB1P06400 928 aa16.66■□□□□ 0.26
NUP54-214ENST00000514307 CTSAP10619 480 aa16.66■□□□□ 0.26
NUP54-214ENST00000514307 COILP38432 576 aaPredicted RBP16.66■□□□□ 0.26
NUP54-214ENST00000514307 FNTAP49354 379 aa16.66■□□□□ 0.26
NUP54-214ENST00000514307 RABGGTBP53611 331 aa16.66■□□□□ 0.26
NUP54-214ENST00000514307 NME3Q13232 169 aa16.66■□□□□ 0.26
NUP54-214ENST00000514307 TXNRD3NBQ6F5E7 133 aa16.66■□□□□ 0.26
NUP54-214ENST00000514307 HFE2Q6ZVN8 426 aa16.66■□□□□ 0.26
NUP54-214ENST00000514307 TADA2BQ86TJ2 420 aa16.66■□□□□ 0.26
NUP54-214ENST00000514307 CCDC105Q8IYK2 499 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms