RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 JAKMIP2Q96AA8 810 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 HNRNPABQ99729 332 aaKnown RBP12.9□□□□□ -0.34
SNHG4-208ENST00000514110 KLF16Q9BXK1 252 aaPredicted RBP12.9□□□□□ -0.34
SNHG4-208ENST00000514110 NMUR1Q9HB89 426 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 POLMQ9NP87 494 aaPredicted RBP12.9□□□□□ -0.34
SNHG4-208ENST00000514110 TLR8Q9NR97 1041 aaKnown RBP12.9□□□□□ -0.34
SNHG4-208ENST00000514110 DEC1Q9P2X7 70 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 MBD1Q9UIS9 605 aaPredicted RBP12.9□□□□□ -0.34
SNHG4-208ENST00000514110 HCN2Q9UL51 889 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 MAPK8IP1Q9UQF2 711 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 THADAQ6YHU6 1953 aa12.9□□□□□ -0.34
SNHG4-208ENST00000514110 KMT2BQ9UMN6 2715 aaPredicted RBP12.9□□□□□ -0.35
SNHG4-208ENST00000514110 TCRBV21S2A2A0A5A6 115 aa12.89□□□□□ -0.35
SNHG4-208ENST00000514110 TBC1D3BA6NDS4 549 aa12.89□□□□□ -0.35
SNHG4-208ENST00000514110 NFIL3Q16649 462 aa12.89□□□□□ -0.35
SNHG4-208ENST00000514110 MAP7D1Q3KQU3 841 aa12.89□□□□□ -0.35
SNHG4-208ENST00000514110 HTR3DQ70Z44 454 aa12.89□□□□□ -0.35
SNHG4-208ENST00000514110 CYP2U1Q7Z449 544 aa12.89□□□□□ -0.35
SNHG4-208ENST00000514110 MIB1Q86YT6 1006 aa12.89□□□□□ -0.35
SNHG4-208ENST00000514110 ZNF513Q8N8E2 541 aaPredicted RBP12.89□□□□□ -0.35
SNHG4-208ENST00000514110 TERB1Q8NA31 727 aa12.89□□□□□ -0.35
SNHG4-208ENST00000514110 WHAMMQ8TF30 809 aa12.89□□□□□ -0.35
SNHG4-208ENST00000514110 CYFIP2Q96F07 1278 aa12.89□□□□□ -0.35
SNHG4-208ENST00000514110 NT5C1AQ9BXI3 368 aa12.89□□□□□ -0.35
SNHG4-208ENST00000514110 GOLPH3LQ9H4A5 285 aa12.89□□□□□ -0.35
SNHG4-208ENST00000514110 MMRN2Q9H8L6 949 aa12.89□□□□□ -0.35
SNHG4-208ENST00000514110 CYLDQ9NQC7 956 aa12.89□□□□□ -0.35
SNHG4-208ENST00000514110 BCCIPQ9P287 314 aaKnown RBP eCLIP12.89□□□□□ -0.35
SNHG4-208ENST00000514110 CIZ1Q9ULV3 898 aaPredicted RBP12.89□□□□□ -0.35
SNHG4-208ENST00000514110 SCML2Q9UQR0 700 aa12.89□□□□□ -0.35
SNHG4-208ENST00000514110 MYH10P35580 1976 aa12.89□□□□□ -0.35
SNHG4-208ENST00000514110 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 A0A1W2PQH9 124 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 KHNYNO15037 678 aaKnown RBP12.88□□□□□ -0.35
SNHG4-208ENST00000514110 MDM4O15151 490 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 CILPO75339 1184 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 KIF20AO95235 890 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 CD58P19256 250 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 ACO1P21399 889 aaKnown RBP12.88□□□□□ -0.35
SNHG4-208ENST00000514110 ATP5C1P36542 298 aaKnown RBP12.88□□□□□ -0.35
SNHG4-208ENST00000514110 WASP42768 502 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 KRT85P78386 507 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 IRX4P78413 519 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 C10orf76Q5T2E6 689 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 PSAPL1Q6NUJ1 521 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 KRBA2Q6ZNG9 492 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 INTS8Q75QN2 995 aaKnown RBP12.88□□□□□ -0.35
SNHG4-208ENST00000514110 ARMCX6Q7L4S7 300 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 FAM186BQ8IYM0 893 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 TMEFF1Q8IYR6 380 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 PIGKQ92643 395 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 SPACA7Q96KW9 195 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 IMPG2Q9BZV3 1241 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 NIF3L1Q9GZT8 377 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 CYP3A43Q9HB55 503 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.88□□□□□ -0.35
SNHG4-208ENST00000514110 NUDT5Q9UKK9 219 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 ANGPTL2Q9UKU9 493 aa12.88□□□□□ -0.35
SNHG4-208ENST00000514110 TNRC6BQ9UPQ9 1833 aaKnown RBP12.88□□□□□ -0.35
SNHG4-208ENST00000514110 ACACBO00763 2458 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 NEDD8-MDP1E9PL57 170 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 CDX4O14627 284 aaPredicted RBP12.87□□□□□ -0.35
SNHG4-208ENST00000514110 GIPC1O14908 333 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 MAP3K13O43283 966 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 RARGP13631 454 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 KRT13P13646 458 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 TYRP14679 529 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 GABRG2P18507 467 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 PSMC2P35998 433 aaKnown RBP12.87□□□□□ -0.35
SNHG4-208ENST00000514110 PTGER3P43115 390 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 KIF11P52732 1056 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 ST3GAL2Q16842 350 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 PREPLQ4J6C6 727 aaPredicted RBP12.87□□□□□ -0.35
SNHG4-208ENST00000514110 ZCWPW2Q504Y3 356 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 PPP1R26Q5T8A7 1209 aaPredicted RBP12.87□□□□□ -0.35
SNHG4-208ENST00000514110 EGFLAMQ63HQ2 1017 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 GRAMD4Q6IC98 578 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 TPGS1Q6ZTW0 290 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 LPCAT2Q7L5N7 544 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 PGBD3Q8N328 593 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 GUF1Q8N442 669 aaKnown RBP12.87□□□□□ -0.35
SNHG4-208ENST00000514110 KCNV2Q8TDN2 545 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 SEMA4DQ92854 862 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 CCDC47Q96A33 483 aaKnown RBP12.87□□□□□ -0.35
SNHG4-208ENST00000514110 P2RY11Q96G91 374 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 ACOX2Q99424 681 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 BBS2Q9BXC9 721 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 PNPLA8Q9NP80 782 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 TMEM9BQ9NQ34 198 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 TMEM74BQ9NUR3 256 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 DNAJC17Q9NVM6 304 aaKnown RBP12.87□□□□□ -0.35
SNHG4-208ENST00000514110 LSM7Q9UK45 103 aaKnown RBP12.87□□□□□ -0.35
SNHG4-208ENST00000514110 STARD13Q9Y3M8 1113 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 PCDHA5Q9Y5H7 936 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 PLXND1Q9Y4D7 1925 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 EPG5Q9HCE0 2579 aa12.87□□□□□ -0.35
SNHG4-208ENST00000514110 TPRP12270 2363 aaKnown RBP12.86□□□□□ -0.35
SNHG4-208ENST00000514110 A0A1W2PQF6 199 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 PRRT4C9JH25 899 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 CACNG3O60359 315 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms