RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.88□□□□□ -0.51
HTT-213ENST00000513806 COMMD8Q9NX08 183 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 MYO1AQ9UBC5 1043 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 SFMBT1Q9UHJ3 866 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 RASAL2Q9UJF2 1139 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 CDH7Q9ULB5 785 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 NENFQ9UMX5 172 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 NAALADL1Q9UQQ1 740 aa11.88□□□□□ -0.51
HTT-213ENST00000513806 COL4A3Q01955 1670 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 SYNJ2BP-COX16A0A087WUM0 186 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 MSI1O43347 362 aaKnown RBP11.87□□□□□ -0.51
HTT-213ENST00000513806 AKR1B10O60218 316 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 TLR5O60602 858 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 RTN2O75298 545 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 OAS1P00973 400 aaKnown RBP11.87□□□□□ -0.51
HTT-213ENST00000513806 LTFP02788 710 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 ASGR2P07307 311 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 MBL2P11226 248 aaPredicted RBP11.87□□□□□ -0.51
HTT-213ENST00000513806 BMP1P13497 986 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 TFE3P19532 575 aaPredicted RBP11.87□□□□□ -0.51
HTT-213ENST00000513806 RRM1P23921 792 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 FCARP24071 287 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 GABRB2P47870 512 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 SLC6A3Q01959 620 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 EFEMP1Q12805 493 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 ARHGAP15Q53QZ3 475 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 RAB6CQ53S08 254 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 C10orf120Q5SQS8 335 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 HECTD3Q5T447 861 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 FAM102AQ5T9C2 384 aaPredicted RBP11.87□□□□□ -0.51
HTT-213ENST00000513806 SMYD5Q6GMV2 418 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 TANGO2Q6ICL3 276 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 MON1AQ86VX9 555 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 FMNL3Q8IVF7 1028 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 ARID3BQ8IVW6 561 aaPredicted RBP11.87□□□□□ -0.51
HTT-213ENST00000513806 DEFB106AQ8N104 65 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 TDRD5Q8NAT2 981 aaKnown RBP11.87□□□□□ -0.51
HTT-213ENST00000513806 LEMD2Q8NC56 503 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 PDZD8Q8NEN9 1154 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 FGF14Q92915 247 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 ARHGEF26Q96DR7 871 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 ASB2Q96Q27 587 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 PANX2Q96RD6 677 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 ADAM33Q9BZ11 813 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 RAB6CQ9H0N0 254 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 SMOC2Q9H3U7 446 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 EHD2Q9NZN4 543 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 COX16Q9P0S2 106 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 IMPACTQ9P2X3 320 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 LIMD1Q9UGP4 676 aa11.87□□□□□ -0.51
HTT-213ENST00000513806 BZW2Q9Y6E2 419 aaKnown RBP11.87□□□□□ -0.51
HTT-213ENST00000513806 TRAV19A0A0A6YYK7 116 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 A0A0U1RQJ8 604 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 FBXO21O94952 628 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 CKMP06732 381 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 LAMP2P13473 410 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 NCAM1P13591 858 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 HDCP19113 662 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 SNX30Q5VWJ9 437 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 ALKBH5Q6P6C2 394 aaKnown RBP11.86□□□□□ -0.51
HTT-213ENST00000513806 MIB1Q86YT6 1006 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.86□□□□□ -0.51
HTT-213ENST00000513806 CMTM8Q8IZV2 173 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 ACRBPQ8NEB7 543 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 ATRIPQ8WXE1 791 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 OVCA2Q8WZ82 227 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 USP13Q92995 863 aaPredicted RBP11.86□□□□□ -0.51
HTT-213ENST00000513806 ZNF653Q96CK0 615 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 CCDC42Q96M95 316 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 ZNF830Q96NB3 372 aaPredicted RBP11.86□□□□□ -0.51
HTT-213ENST00000513806 ASB16Q96NS5 453 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 BAG1Q99933 345 aaPredicted RBP11.86□□□□□ -0.51
HTT-213ENST00000513806 TRIM7Q9C029 511 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 THAP2Q9H0W7 228 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 ISCUQ9H1K1 167 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 CD320Q9NPF0 282 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 CYLDQ9NQC7 956 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 CALCOCO1Q9P1Z2 691 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 CPQQ9Y646 472 aa11.86□□□□□ -0.51
HTT-213ENST00000513806 SSU72P8A0A1W2PR75 194 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 TCRBV5S1A1TA0A578 114 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 DAB1O75553 588 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 FGF19O95750 216 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 CALB1P05937 261 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 RALAP11233 206 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 GZMAP12544 262 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 FECHP22830 423 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 FLT3P36888 993 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 ATXN1P54253 815 aaKnown RBP11.85□□□□□ -0.51
HTT-213ENST00000513806 GALCP54803 685 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 RPL7AP62424 266 aaKnown RBP11.85□□□□□ -0.51
HTT-213ENST00000513806 CDK17Q00537 523 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 OGDHQ02218 1023 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 ZP2Q05996 745 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 C1QBPQ07021 282 aaKnown RBP11.85□□□□□ -0.51
HTT-213ENST00000513806 GRM2Q14416 872 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 SLC18A3Q16572 532 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 C15orf59Q2T9L4 293 aaPredicted RBP11.85□□□□□ -0.51
HTT-213ENST00000513806 PUS10Q3MIT2 529 aaKnown RBP11.85□□□□□ -0.51
HTT-213ENST00000513806 DCAF6Q58WW2 860 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms