RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 OPRD1P41143 372 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 GALK1P51570 392 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 TKTL1P51854 596 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 KPNA1P52294 538 aaPredicted RBP10.21□□□□□ -0.77
RNF4-221ENST00000513643 MFAP3P55082 362 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 IFRD2Q12894 506 aaPredicted RBP10.21□□□□□ -0.77
RNF4-221ENST00000513643 MTAPQ13126 283 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 DHCR24Q15392 516 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 DGKKQ5KSL6 1271 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 KLHDC7AQ5VTJ3 777 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 NAIF1Q69YI7 327 aaPredicted RBP10.21□□□□□ -0.77
RNF4-221ENST00000513643 FSTL4Q6MZW2 842 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 CC2D1AQ6P1N0 951 aaPredicted RBP10.21□□□□□ -0.77
RNF4-221ENST00000513643 TMEM110Q86TL2 294 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 FAM71AQ8IYT1 594 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 WDTC1Q8N5D0 677 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 TTC8Q8TAM2 541 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 UBA3Q8TBC4 463 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 ZNF606Q8WXB4 792 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 PHOX2BQ99453 314 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 SLC4A5Q9BY07 1137 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 PLCB1Q9NQ66 1216 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 CNGB3Q9NQW8 809 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 FANCLQ9NW38 375 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 SMPD4Q9NXE4 827 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 CFAP97Q9P2B7 532 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 TBC1D14Q9P2M4 693 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 LIMA1Q9UHB6 759 aaKnown RBP10.21□□□□□ -0.77
RNF4-221ENST00000513643 CYTH4Q9UIA0 394 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 FBXO4Q9UKT5 387 aa10.21□□□□□ -0.77
RNF4-221ENST00000513643 FOXN3O00409 490 aaPredicted RBP10.2□□□□□ -0.78
RNF4-221ENST00000513643 GFRA2O00451 464 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 SLC9A3R1O14745 358 aaPredicted RBP10.2□□□□□ -0.78
RNF4-221ENST00000513643 NFATC1O95644 943 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 KLKB1P03952 638 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 CYP17A1P05093 508 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 SP9P0CG40 484 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 HOXA6P31267 233 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 HOXD11P31277 338 aaPredicted RBP10.2□□□□□ -0.78
RNF4-221ENST00000513643 CLCN1P35523 988 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 IFNAR2P48551 515 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 SLC8A3P57103 927 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 DAOAP59103 153 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 PON2Q15165 354 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 KRT31Q15323 416 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 STX1AQ16623 288 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 TPD52L1Q16890 204 aaPredicted RBP10.2□□□□□ -0.78
RNF4-221ENST00000513643 SASS6Q6UVJ0 657 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 BEND5Q7L4P6 421 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 ETFBKMTQ8IXQ9 262 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 ARHGAP18Q8N392 663 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 PHTF2Q8N3S3 785 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 SPEM1Q8N4L4 309 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 CPA6Q8N4T0 437 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 IRGQQ8WZA9 623 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 NDRG1Q92597 394 aaKnown RBP10.2□□□□□ -0.78
RNF4-221ENST00000513643 SECISBP2LQ93073 1101 aaKnown RBP10.2□□□□□ -0.78
RNF4-221ENST00000513643 FAM122AQ96E09 287 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 P2RY11Q96G91 374 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 CDK5RAP1Q96SZ6 601 aaKnown RBP10.2□□□□□ -0.78
RNF4-221ENST00000513643 BPIFA3Q9BQP9 254 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 ULBP1Q9BZM6 244 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 ACP6Q9NPH0 428 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 MARK1Q9P0L2 795 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 HESX1Q9UBX0 185 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 DNMT3LQ9UJW3 386 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 NAGPAQ9UK23 515 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 DNAJC12Q9UKB3 198 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 NDRG2Q9UN36 371 aaKnown RBP10.2□□□□□ -0.78
RNF4-221ENST00000513643 PCDHGC3Q9UN70 934 aa10.2□□□□□ -0.78
RNF4-221ENST00000513643 HELZP42694 1942 aaKnown RBP10.19□□□□□ -0.78
RNF4-221ENST00000513643 YJEFN3A6XGL0 299 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 CHURC1-FNTBB4DL54 471 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 E7ENQ6 273 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 HOXC11O43248 304 aaPredicted RBP10.19□□□□□ -0.78
RNF4-221ENST00000513643 STC2O76061 302 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 FYNP06241 537 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 DRD1P21728 446 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 EIF2DP41214 584 aaKnown RBP10.19□□□□□ -0.78
RNF4-221ENST00000513643 YWHAGP61981 247 aaKnown RBP eCLIP10.19□□□□□ -0.78
RNF4-221ENST00000513643 AMPD2Q01433 879 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 MYL5Q02045 173 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 TYRO3Q06418 890 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 ADIGQ0VDE8 80 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 MESP2Q0VG99 397 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 EIF4EBP2Q13542 120 aaPredicted RBP10.19□□□□□ -0.78
RNF4-221ENST00000513643 LRRC32Q14392 662 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 TRIP4Q15650 581 aaPredicted RBP10.19□□□□□ -0.78
RNF4-221ENST00000513643 KLHL40Q2TBA0 621 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 HSP90AA4PQ58FG1 418 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 BSPRYQ5W0U4 402 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 DENND1BQ6P3S1 775 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 BBS7Q8IWZ6 715 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 FAM217AQ8IXS0 508 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 ZBTB44Q8NCP5 570 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 DDX1Q92499 740 aaKnown RBP10.19□□□□□ -0.78
RNF4-221ENST00000513643 P2RY13Q9BPV8 354 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 GANQ9H2C0 597 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 LHX5Q9H2C1 402 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 LRRC4Q9HBW1 653 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms