RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 SLC22A12Q96S37 553 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 DPEP3Q9H4B8 488 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 EBF3Q9H4W6 596 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 TRPC7Q9HCX4 862 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 ARHGAP26Q9UNA1 814 aa10.44□□□□□ -0.74
CCL28-203ENST00000513525 C2orf78A6NCI8 922 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 FAM187AA6NFU0 413 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 F8VP50 259 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 K7ESF4 209 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 VNN1O95497 513 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 OLFM2O95897 454 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 NR3C1P04150 777 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 ARSAP15289 507 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 HOXA6P31267 233 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 CNR2P34972 360 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 USP46P62068 366 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 UBXN1Q04323 297 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 NCOA4Q13772 614 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 ZACNQ401N2 412 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 ZNF667Q5HYK9 610 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 CEP135Q66GS9 1140 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 CPA6Q8N4T0 437 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 GPR161Q8N6U8 529 aaKnown RBP10.43□□□□□ -0.74
CCL28-203ENST00000513525 ARL14EPQ8N8R7 260 aaPredicted RBP10.43□□□□□ -0.74
CCL28-203ENST00000513525 TAF4BQ92750 862 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 SECISBP2LQ93073 1101 aaKnown RBP10.43□□□□□ -0.74
CCL28-203ENST00000513525 PPP1R13BQ96KQ4 1090 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 CYP2S1Q96SQ9 504 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 HINFPQ9BQA5 517 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 VPS16Q9H269 839 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 TMEM30AQ9NV96 361 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 TRPM5Q9NZQ8 1165 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 NCDNQ9UBB6 729 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 NXF1Q9UBU9 619 aaKnown RBP10.43□□□□□ -0.74
CCL28-203ENST00000513525 THADAQ6YHU6 1953 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 ATP8B3O60423 1300 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 TNRC6BQ9UPQ9 1833 aaKnown RBP10.43□□□□□ -0.74
CCL28-203ENST00000513525 USP27XA6NNY8 438 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 CALUO43852 315 aaPredicted RBP10.43□□□□□ -0.74
CCL28-203ENST00000513525 GYPCP04921 128 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 HDCP19113 662 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 GJA4P35212 333 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 IFNAR2P48551 515 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 CACNA2D1P54289 1103 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 DLG4P78352 724 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 FOXK2Q01167 660 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 ENPEPQ07075 957 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 GRSF1Q12849 480 aaKnown RBP eCLIP10.43□□□□□ -0.74
CCL28-203ENST00000513525 SGSM1Q2NKQ1 1148 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 EML3Q32P44 896 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 FSTL4Q6MZW2 842 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 TREML4Q6UXN2 200 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 ERMP1Q7Z2K6 904 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 LONP2Q86WA8 852 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 KIAA2013Q8IYS2 634 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 DCLK2Q8N568 766 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 SH3RF2Q8TEC5 729 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 OVCA2Q8WZ82 227 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 ATP2A3Q93084 1043 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 EXOC4Q96A65 974 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 TNIP3Q96KP6 325 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 CNOT6LQ96LI5 555 aaKnown RBP10.43□□□□□ -0.74
CCL28-203ENST00000513525 CEP63Q96MT8 703 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 TUBGCP2Q9BSJ2 902 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 NUP58Q9BVL2 599 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 B3GNT5Q9BYG0 378 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 ZNF518BQ9C0D4 1074 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 SMYD3Q9H7B4 428 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 ECT2Q9H8V3 914 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 DUS2Q9NX74 493 aaKnown RBP10.43□□□□□ -0.74
CCL28-203ENST00000513525 FRMD4BQ9Y2L6 1034 aa10.43□□□□□ -0.74
CCL28-203ENST00000513525 SDK1Q7Z5N4 2213 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 UQCRHLA0A096LP55 91 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 ZNF840PA6NDX5 716 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 CHURC1-FNTBB4DL54 471 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 DYNC1I1O14576 645 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 RTN3O95197 1032 aaPredicted RBP10.42□□□□□ -0.74
CCL28-203ENST00000513525 GNA14O95837 355 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 ASS1P00966 412 aaKnown RBP10.42□□□□□ -0.74
CCL28-203ENST00000513525 OAS1P00973 400 aaKnown RBP10.42□□□□□ -0.74
CCL28-203ENST00000513525 UQCRHP07919 91 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 P4HA1P13674 534 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 DRD1P21728 446 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 MTIF2P46199 727 aaKnown RBP10.42□□□□□ -0.74
CCL28-203ENST00000513525 ADKP55263 362 aaKnown RBP10.42□□□□□ -0.74
CCL28-203ENST00000513525 CDH8P55286 799 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 MCCD1P59942 119 aaPredicted RBP10.42□□□□□ -0.74
CCL28-203ENST00000513525 SLC7A9P82251 487 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 FBXO43Q4G163 708 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 ZCWPW2Q504Y3 356 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 FIGNQ5HY92 759 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 C1orf220Q5T0J3 134 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 LAIR1Q6GTX8 287 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 PAQR9Q6ZVX9 377 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 SV2AQ7L0J3 742 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 FAM35AQ86V20 835 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 TMTC1Q8IUR5 882 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 NUP93Q8N1F7 819 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 PDZD8Q8NEN9 1154 aa10.42□□□□□ -0.74
CCL28-203ENST00000513525 SLITRK1Q96PX8 696 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms