RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 KIAA1549LQ6ZVL6 1849 aa7.96□□□□□ -1.13
HMGXB3-204ENST00000513318 A0A087X0T9 212 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 A0A1W2PRU2 124 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 SOBPA7XYQ1 873 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 DDX3XO00571 662 aaKnown RBP eCLIP7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 PAPSS1O43252 624 aaPredicted RBP7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 AKR1B10O60218 316 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 RTN2O75298 545 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 F11P03951 625 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 ERBB2P04626 1255 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 CALB1P05937 261 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 USP17L7P0C7H9 530 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 ZDHHC11BP0C7U3 371 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 FAM228BP0C875 321 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 PFKLP17858 780 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 MMP8P22894 467 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 FSHRP23945 695 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 DDX6P26196 483 aaKnown RBP eCLIP7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 SCNN1AP37088 669 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 EIF4A3P38919 411 aaKnown RBP7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 CCR2P41597 374 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 GABRB2P47870 512 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 TUBP50607 506 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 MRPS5P82675 430 aaKnown RBP7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 CYP4F8P98187 520 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 SMAD2Q15796 467 aaKnown RBP7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 SLC18A3Q16572 532 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 ARHGAP15Q53QZ3 475 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 TJAP1Q5JTD0 557 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 SNX30Q5VWJ9 437 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 PM20D1Q6GTS8 502 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 PTCRAQ6ISU1 281 aaPredicted RBP7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 ACAD10Q6JQN1 1059 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 MMS22LQ6ZRQ5 1243 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 FAM183BPQ6ZVS7 135 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 MON1BQ7L1V2 547 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 GET4Q7L5D6 327 aaPredicted RBP7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 TMEM150AQ86TG1 271 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 MON1AQ86VX9 555 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 ARHGAP18Q8N392 663 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 CCDC112Q8NEF3 446 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 SLC30A5Q8TAD4 765 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 SHKBP1Q8TBC3 707 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 CPA5Q8WXQ8 436 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 GOLGA1Q92805 767 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 C18orf8Q96DM3 657 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 TCEAL4Q96EI5 215 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 VCPIP1Q96JH7 1222 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 PDLIM2Q96JY6 352 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 CCDC42Q96M95 316 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 CHP1Q99653 195 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 C11orf70Q9BRQ4 267 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 FAM117AQ9C073 453 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 ATXN3LQ9H3M9 355 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 POMKQ9H5K3 350 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 NHEJ1Q9H9Q4 299 aaPredicted RBP7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 ADAM22Q9P0K1 906 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 GMIPQ9P107 970 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 WDR35Q9P2L0 1181 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 TJP2Q9UDY2 1190 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 ADAMTS1Q9UHI8 967 aa7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 SPTBN5Q9NRC6 3674 aaKnown RBP7.96□□□□□ -1.14
HMGXB3-204ENST00000513318 CHD5Q8TDI0 1954 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 COL4A2P08572 1712 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 XIRP2A4UGR9 3374 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 ZNF840PA6NDX5 716 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 YJEFN3A6XGL0 299 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 TMCO5BA8MYB1 307 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 E7ENQ6 273 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 PIK3R2O00459 728 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 NRDCO43847 1150 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 HSF2BPO75031 334 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 MOSPD3O75425 235 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 OLFM2O95897 454 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 OAS1P00973 400 aaKnown RBP7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 LTFP02788 710 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 GLI1P08151 1106 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 RALAP11233 206 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 GJA1P17302 382 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 CEBPBP17676 345 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 CYLC1P35663 651 aaPredicted RBP7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 YWHAGP61981 247 aaKnown RBP eCLIP7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 TFF2Q03403 129 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 PTP4A2Q12974 167 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 ZNF268Q14587 947 aaPredicted RBP7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 TEAD2Q15562 447 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 ASTE1Q2TB18 679 aaPredicted RBP7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 EFHC1Q5JVL4 640 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 FAM102AQ5T9C2 384 aaPredicted RBP7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 OR6B2Q6IFH4 312 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 ALKBH5Q6P6C2 394 aaKnown RBP7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 BLOC1S3Q6QNY0 202 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 OLFML1Q6UWY5 402 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 BEND5Q7L4P6 421 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 SLC26A9Q7LBE3 791 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 BHLHA9Q7RTU4 235 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 TADA2BQ86TJ2 420 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 XYLT1Q86Y38 959 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms