RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 DNMT3LQ9UJW3 386 aa18.65■□□□□ 0.58
DDR1-272ENST00000513243 AJAP1Q9UKB5 411 aaPredicted RBP18.65■□□□□ 0.58
DDR1-272ENST00000513243 SH3BP1Q9Y3L3 701 aa18.65■□□□□ 0.58
DDR1-272ENST00000513243 CACNA1IQ9P0X4 2223 aa18.65■□□□□ 0.58
DDR1-272ENST00000513243 M0QYV0 167 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 GREM1O60565 184 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 CYP17A1P05093 508 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 SP9P0CG40 484 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 IRF1P10914 325 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 RALAP11233 206 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 RGS7P49802 495 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 YWHAGP61981 247 aaKnown RBP eCLIP18.64■□□□□ 0.57
DDR1-272ENST00000513243 KCNMA1Q12791 1236 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 DHCR24Q15392 516 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 GAB4Q2WGN9 574 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 PMF1Q6P1K2 205 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 RHBDF2Q6PJF5 856 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 MAMSTRQ6ZN01 415 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 Q6ZS52 159 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 BBS7Q8IWZ6 715 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 ARHGAP18Q8N392 663 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 SHC3Q92529 594 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 P2RY13Q9BPV8 354 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 ACP6Q9NPH0 428 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 FANCLQ9NW38 375 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 TAB2Q9NYJ8 693 aa18.64■□□□□ 0.57
DDR1-272ENST00000513243 PES1O00541 588 aaKnown RBP18.63■□□□□ 0.57
DDR1-272ENST00000513243 USP8P40818 1118 aa18.63■□□□□ 0.57
DDR1-272ENST00000513243 GRSF1Q12849 480 aaKnown RBP eCLIP18.63■□□□□ 0.57
DDR1-272ENST00000513243 HTR3DQ70Z44 454 aa18.63■□□□□ 0.57
DDR1-272ENST00000513243 TADA2BQ86TJ2 420 aa18.63■□□□□ 0.57
DDR1-272ENST00000513243 SIX6OS1Q8N1H7 587 aa18.63■□□□□ 0.57
DDR1-272ENST00000513243 ZNF606Q8WXB4 792 aa18.63■□□□□ 0.57
DDR1-272ENST00000513243 IER2Q9BTL4 223 aa18.63■□□□□ 0.57
DDR1-272ENST00000513243 DNAJC12Q9UKB3 198 aa18.63■□□□□ 0.57
DDR1-272ENST00000513243 FBXO4Q9UKT5 387 aa18.63■□□□□ 0.57
DDR1-272ENST00000513243 PIK3R2O00459 728 aa18.62■□□□□ 0.57
DDR1-272ENST00000513243 LETM1O95202 739 aaPredicted RBP18.62■□□□□ 0.57
DDR1-272ENST00000513243 EGFP01133 1207 aa18.62■□□□□ 0.57
DDR1-272ENST00000513243 LCP1P13796 627 aa18.62■□□□□ 0.57
DDR1-272ENST00000513243 NBL1P41271 181 aa18.62■□□□□ 0.57
DDR1-272ENST00000513243 CSTF1Q05048 431 aaKnown RBP18.62■□□□□ 0.57
DDR1-272ENST00000513243 DENND1BQ6P3S1 775 aa18.62■□□□□ 0.57
DDR1-272ENST00000513243 MIB1Q86YT6 1006 aa18.62■□□□□ 0.57
DDR1-272ENST00000513243 SYNPOQ8N3V7 929 aa18.62■□□□□ 0.57
DDR1-272ENST00000513243 CD101Q93033 1021 aa18.62■□□□□ 0.57
DDR1-272ENST00000513243 OTUB2Q96DC9 234 aa18.62■□□□□ 0.57
DDR1-272ENST00000513243 HSFY1Q96LI6 401 aa18.62■□□□□ 0.57
DDR1-272ENST00000513243 CDK5RAP1Q96SZ6 601 aaKnown RBP18.62■□□□□ 0.57
DDR1-272ENST00000513243 CNGB3Q9NQW8 809 aa18.62■□□□□ 0.57
DDR1-272ENST00000513243 PRMT8Q9NR22 394 aaPredicted RBP18.62■□□□□ 0.57
DDR1-272ENST00000513243 YJEFN3A6XGL0 299 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 E7ENQ6 273 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 THAP12O43422 761 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 DRD1P21728 446 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 GNA15P30679 374 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 OPRD1P41143 372 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 GPD2P43304 727 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 DAOAP59103 153 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 MYL5Q02045 173 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 TYRO3Q06418 890 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 GOLGA8FQ08AF8 430 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 GOLGA8DPQ0D2H9 430 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 EFEMP1Q12805 493 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 KRT31Q15323 416 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 LY6G5CQ5SRR4 150 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 BSPRYQ5W0U4 402 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 CAVIN1Q6NZI2 390 aaKnown RBP18.61■□□□□ 0.57
DDR1-272ENST00000513243 TSSK4Q6SA08 328 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 RSRC2Q7L4I2 434 aaKnown RBP18.61■□□□□ 0.57
DDR1-272ENST00000513243 SCML4Q8N228 414 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 SPEM1Q8N4L4 309 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 EZH1Q92800 747 aaPredicted RBP18.61■□□□□ 0.57
DDR1-272ENST00000513243 VPS16Q9H269 839 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 RASAL2Q9UJF2 1139 aa18.61■□□□□ 0.57
DDR1-272ENST00000513243 PROB1E7EW31 1015 aa18.6■□□□□ 0.57
DDR1-272ENST00000513243 FOXN3O00409 490 aaPredicted RBP18.6■□□□□ 0.57
DDR1-272ENST00000513243 MED7O43513 233 aa18.6■□□□□ 0.57
DDR1-272ENST00000513243 STC2O76061 302 aa18.6■□□□□ 0.57
DDR1-272ENST00000513243 ADH1CP00326 375 aa18.6■□□□□ 0.57
DDR1-272ENST00000513243 CCR3P51677 355 aa18.6■□□□□ 0.57
DDR1-272ENST00000513243 SATB1Q01826 763 aa18.6■□□□□ 0.57
DDR1-272ENST00000513243 ZNF528Q3MIS6 628 aa18.6■□□□□ 0.57
DDR1-272ENST00000513243 KLHDC7AQ5VTJ3 777 aa18.6■□□□□ 0.57
DDR1-272ENST00000513243 BTBD8Q5XKL5 378 aa18.6■□□□□ 0.57
DDR1-272ENST00000513243 SMYD5Q6GMV2 418 aa18.6■□□□□ 0.57
DDR1-272ENST00000513243 TMEM25Q86YD3 366 aa18.6■□□□□ 0.57
DDR1-272ENST00000513243 EXOC4Q96A65 974 aa18.6■□□□□ 0.57
DDR1-272ENST00000513243 C2orf42Q9NWW7 574 aa18.6■□□□□ 0.57
DDR1-272ENST00000513243 MARCH2Q9P0N8 246 aa18.6■□□□□ 0.57
DDR1-272ENST00000513243 R4GN57 208 aa18.6■□□□□ 0.57
DDR1-272ENST00000513243 KLKB1P03952 638 aa18.59■□□□□ 0.57
DDR1-272ENST00000513243 PNMA6AP0CW24 399 aaPredicted RBP18.59■□□□□ 0.57
DDR1-272ENST00000513243 ADH5P11766 374 aa18.59■□□□□ 0.57
DDR1-272ENST00000513243 TDGF1P13385 188 aa18.59■□□□□ 0.57
DDR1-272ENST00000513243 HOXD11P31277 338 aaPredicted RBP18.59■□□□□ 0.57
DDR1-272ENST00000513243 CXCL12P48061 93 aa18.59■□□□□ 0.57
DDR1-272ENST00000513243 SLC6A11P48066 632 aa18.59■□□□□ 0.57
DDR1-272ENST00000513243 RPL34P49207 117 aaKnown RBP18.59■□□□□ 0.57
DDR1-272ENST00000513243 MRE11P49959 708 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms