RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 SMARCB1Q12824 385 aa10.13□□□□□ -0.79
TRIO-220ENST00000512979 MTAPQ13126 283 aa10.13□□□□□ -0.79
TRIO-220ENST00000512979 GAS6Q14393 721 aa10.13□□□□□ -0.79
TRIO-220ENST00000512979 TAF12Q16514 161 aa10.13□□□□□ -0.79
TRIO-220ENST00000512979 ARHGAP15Q53QZ3 475 aa10.13□□□□□ -0.79
TRIO-220ENST00000512979 GPR158Q5T848 1215 aa10.13□□□□□ -0.79
TRIO-220ENST00000512979 TSSK4Q6SA08 328 aa10.13□□□□□ -0.79
TRIO-220ENST00000512979 LRRTM3Q86VH5 581 aa10.13□□□□□ -0.79
TRIO-220ENST00000512979 ARID3BQ8IVW6 561 aaPredicted RBP10.13□□□□□ -0.79
TRIO-220ENST00000512979 CCDC65Q8IXS2 484 aa10.13□□□□□ -0.79
TRIO-220ENST00000512979 DCP1BQ8IZD4 617 aaKnown RBP10.13□□□□□ -0.79
TRIO-220ENST00000512979 CACTIN-AS1Q8N1I8 211 aa10.13□□□□□ -0.79
TRIO-220ENST00000512979 SPPL2BQ8TCT7 592 aa10.13□□□□□ -0.79
TRIO-220ENST00000512979 CSGALNACT1Q8TDX6 532 aa10.13□□□□□ -0.79
TRIO-220ENST00000512979 C2orf15Q8WU43 125 aaKnown RBP10.13□□□□□ -0.79
TRIO-220ENST00000512979 ATRIPQ8WXE1 791 aa10.13□□□□□ -0.79
TRIO-220ENST00000512979 GCNAQ96QF7 691 aa10.13□□□□□ -0.79
TRIO-220ENST00000512979 CBWD1Q9BRT8 395 aa10.13□□□□□ -0.79
TRIO-220ENST00000512979 TMEM206Q9H813 350 aa10.13□□□□□ -0.79
TRIO-220ENST00000512979 AGAP1Q9UPQ3 857 aa10.13□□□□□ -0.79
TRIO-220ENST00000512979 hCG_2014768A0A024R1R8 64 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 ELOA3CA0A087WX78 387 aaPredicted RBP10.12□□□□□ -0.79
TRIO-220ENST00000512979 ELOA3DA6NLF2 546 aaPredicted RBP10.12□□□□□ -0.79
TRIO-220ENST00000512979 B2RBV5 119 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 ARNTLO00327 626 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 SPTLC2O15270 562 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 CHADO15335 359 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 EXTL3O43909 919 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 ECEL1O95672 775 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 ITGB3P05106 788 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 HAPLN1P10915 354 aaPredicted RBP10.12□□□□□ -0.79
TRIO-220ENST00000512979 CCNE1P24864 410 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 CDC25CP30307 473 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 ID4P47928 161 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 KPNA1P52294 538 aaPredicted RBP10.12□□□□□ -0.79
TRIO-220ENST00000512979 CYP4F8P98187 520 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 TSPY1Q01534 308 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 FCHO2Q0JRZ9 810 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 BFSP1Q12934 665 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 ELOA3BQ3SY89 546 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 WIPI1Q5MNZ9 446 aaPredicted RBP10.12□□□□□ -0.79
TRIO-220ENST00000512979 FILIP1Q7Z7B0 1213 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 PDCL2Q8N4E4 241 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 IL22RA1Q8N6P7 574 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 C19orf47Q8N9M1 422 aaKnown RBP10.12□□□□□ -0.79
TRIO-220ENST00000512979 LINC00301Q8NCQ3 95 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 ELOA3Q8NG57 546 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 CACTINQ8WUQ7 758 aaKnown RBP10.12□□□□□ -0.79
TRIO-220ENST00000512979 FAM84AQ96KN4 292 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 TNMDQ9H2S6 317 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 PCIF1Q9H4Z3 704 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 TASP1Q9H6P5 420 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 LMAN1LQ9HAT1 526 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 PRMT8Q9NR22 394 aaPredicted RBP10.12□□□□□ -0.79
TRIO-220ENST00000512979 ZSCAN32Q9NX65 697 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 PCDHGA2Q9Y5H1 932 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 GPR179Q6PRD1 2367 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 TSC2P49815 1807 aa10.12□□□□□ -0.79
TRIO-220ENST00000512979 CFAP54Q96N23 3096 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 ANK1P16157 1881 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 A0A1W2PQH9 124 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 SLC38A8A6NNN8 435 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 GFRA2O00451 464 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 HUS1O60921 280 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 HTR3BO95264 441 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 PRAMEF12O95522 483 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 KRT19P08727 400 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 TMEM191BP0C7N4 346 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 GPR15P49685 360 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 RBP5P82980 135 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 INPP5AQ14642 412 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 LMBRD2Q68DH5 695 aaPredicted RBP10.11□□□□□ -0.79
TRIO-220ENST00000512979 STXBP4Q6ZWJ1 553 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 KIAA2013Q8IYS2 634 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 GPD1LQ8N335 351 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 DCLK2Q8N568 766 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 CSGALNACT2Q8N6G5 542 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 LRRC52Q8N7C0 313 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 SUMF1Q8NBK3 374 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 ZBTB44Q8NCP5 570 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 TTC8Q8TAM2 541 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 RUBCNQ92622 972 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 HPS3Q969F9 1004 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 MSANTD3Q96H12 275 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 ZFYVE19Q96K21 471 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 ZNF396Q96N95 335 aaPredicted RBP10.11□□□□□ -0.79
TRIO-220ENST00000512979 LRRC3BQ96PB8 259 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 IER2Q9BTL4 223 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 PI4K2AQ9BTU6 479 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 MTMR12Q9C0I1 747 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 LRRC27Q9C0I9 530 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 C8orf33Q9H7E9 229 aaPredicted RBP10.11□□□□□ -0.79
TRIO-220ENST00000512979 PDE11AQ9HCR9 933 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 TMLHEQ9NVH6 421 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 DDX43Q9NXZ2 648 aaKnown RBP10.11□□□□□ -0.79
TRIO-220ENST00000512979 OBP2AQ9NY56 170 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 ITGA11Q9UKX5 1188 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 L1RE1Q9UN81 338 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 CORINQ9Y5Q5 1042 aa10.11□□□□□ -0.79
TRIO-220ENST00000512979 OTOGLQ3ZCN5 2332 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms