RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 LSM7Q9UK45 103 aaKnown RBP13.29□□□□□ -0.28
VEGFA-216ENST00000512683 PILRBQ9UKJ0 227 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 WASF3Q9UPY6 502 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 SCML2Q9UQR0 700 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 ZNF510Q9Y2H8 683 aa13.29□□□□□ -0.28
VEGFA-216ENST00000512683 TCRBV21S2A2A0A5A6 115 aa13.28□□□□□ -0.28
VEGFA-216ENST00000512683 LRRIQ3A6PVS8 624 aaPredicted RBP13.28□□□□□ -0.28
VEGFA-216ENST00000512683 H0Y626 953 aa13.28□□□□□ -0.28
VEGFA-216ENST00000512683 CACNG3O60359 315 aa13.28□□□□□ -0.28
VEGFA-216ENST00000512683 TRIM16O95361 564 aa13.28□□□□□ -0.28
VEGFA-216ENST00000512683 SERPINF2P08697 491 aa13.28□□□□□ -0.28
VEGFA-216ENST00000512683 PLA2G4AP47712 749 aa13.28□□□□□ -0.28
VEGFA-216ENST00000512683 KRT85P78386 507 aa13.28□□□□□ -0.28
VEGFA-216ENST00000512683 ZNF252P-AS1Q0IIN9 211 aa13.28□□□□□ -0.28
VEGFA-216ENST00000512683 KMT5BQ4FZB7 885 aa13.28□□□□□ -0.28
VEGFA-216ENST00000512683 METTL3Q86U44 580 aaKnown RBP13.28□□□□□ -0.28
VEGFA-216ENST00000512683 C12orf40Q86WS4 652 aa13.28□□□□□ -0.28
VEGFA-216ENST00000512683 TMEM25Q86YD3 366 aa13.28□□□□□ -0.28
VEGFA-216ENST00000512683 BBS7Q8IWZ6 715 aa13.28□□□□□ -0.28
VEGFA-216ENST00000512683 PLEKHO2Q8TD55 490 aa13.28□□□□□ -0.28
VEGFA-216ENST00000512683 HMGB4Q8WW32 186 aa13.28□□□□□ -0.28
VEGFA-216ENST00000512683 CDK5RAP1Q96SZ6 601 aaKnown RBP13.28□□□□□ -0.28
VEGFA-216ENST00000512683 HNRNPABQ99729 332 aaKnown RBP13.28□□□□□ -0.28
VEGFA-216ENST00000512683 SMOQ99835 787 aa13.28□□□□□ -0.28
VEGFA-216ENST00000512683 KLF16Q9BXK1 252 aaPredicted RBP13.28□□□□□ -0.28
VEGFA-216ENST00000512683 FAM124BQ9H5Z6 455 aaPredicted RBP13.28□□□□□ -0.28
VEGFA-216ENST00000512683 SMYD3Q9H7B4 428 aa13.28□□□□□ -0.28
VEGFA-216ENST00000512683 CCSER2Q9H7U1 834 aa13.28□□□□□ -0.28
VEGFA-216ENST00000512683 MBD1Q9UIS9 605 aaPredicted RBP13.28□□□□□ -0.28
VEGFA-216ENST00000512683 FRMD4BQ9Y2L6 1034 aa13.28□□□□□ -0.28
VEGFA-216ENST00000512683 PCDHA5Q9Y5H7 936 aa13.28□□□□□ -0.28
VEGFA-216ENST00000512683 USP24Q9UPU5 2620 aa13.27□□□□□ -0.28
VEGFA-216ENST00000512683 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 A0A1W2PQD8 194 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 GREM1O60565 184 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 VNN1O95497 513 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 ASS1P00966 412 aaKnown RBP13.27□□□□□ -0.29
VEGFA-216ENST00000512683 SYPP08247 313 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 FAM200BP0CF97 657 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 ENGP17813 658 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 PTGER3P43115 390 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 NDUFA8P51970 172 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 ATXN3P54252 364 aaPredicted RBP13.27□□□□□ -0.29
VEGFA-216ENST00000512683 GFPT1Q06210 699 aaPredicted RBP13.27□□□□□ -0.29
VEGFA-216ENST00000512683 MESP2Q0VG99 397 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 IFRD2Q12894 506 aaPredicted RBP13.27□□□□□ -0.29
VEGFA-216ENST00000512683 SEMA3BQ13214 749 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 SLC14A1Q13336 389 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 NFIL3Q16649 462 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 ANO4Q32M45 955 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 GRAMD4Q6IC98 578 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 UNQ6494/PRO21346Q6UXR6 183 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 SV2AQ7L0J3 742 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 ACOT1Q86TX2 421 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 TMEFF1Q8IYR6 380 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 HDDC3Q8N4P3 179 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 TTC39CQ8N584 583 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 ZMIZ2Q8NF64 920 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 SLC2A14Q8TDB8 520 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 RLN3Q8WXF3 142 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 GABRG3Q99928 467 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 UBXN6Q9BZV1 441 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 KCTD10Q9H3F6 313 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 GMIPQ9P107 970 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 DNMT3LQ9UJW3 386 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 FBXO10Q9UK96 956 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 TRAF3IP3Q9Y228 551 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 NFE2L3Q9Y4A8 694 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 MYH10P35580 1976 aa13.27□□□□□ -0.29
VEGFA-216ENST00000512683 CHD6Q8TD26 2715 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 A0A1W2PQF6 199 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 PATE3B3GLJ2 98 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 CALUO43852 315 aaPredicted RBP13.26□□□□□ -0.29
VEGFA-216ENST00000512683 HOXB2P14652 356 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 CASP4P49662 377 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 NDST1P52848 882 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 MCCD1P59942 119 aaPredicted RBP13.26□□□□□ -0.29
VEGFA-216ENST00000512683 COG7P83436 770 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 KDSRQ06136 332 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 INCA1Q0VD86 236 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 C10orf76Q5T2E6 689 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 SYCP2LQ5T4T6 812 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 PIP4P1Q86T03 277 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 NAT16Q8N8M0 369 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 FOXJ1Q92949 421 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 CCDC47Q96A33 483 aaKnown RBP13.26□□□□□ -0.29
VEGFA-216ENST00000512683 ZNF419Q96HQ0 510 aaPredicted RBP13.26□□□□□ -0.29
VEGFA-216ENST00000512683 NT5C1AQ9BXI3 368 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 IMPG2Q9BZV3 1241 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 DCLK3Q9C098 648 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 KRT82Q9NSB4 513 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 TMEM74BQ9NUR3 256 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 EXOC1Q9NV70 894 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 DNAJC17Q9NVM6 304 aaKnown RBP13.26□□□□□ -0.29
VEGFA-216ENST00000512683 CLIC5Q9NZA1 410 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 SUSD2Q9UGT4 822 aa13.26□□□□□ -0.29
VEGFA-216ENST00000512683 CIZ1Q9ULV3 898 aaPredicted RBP13.26□□□□□ -0.29
VEGFA-216ENST00000512683 FAM221BA6H8Z2 402 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 GIPC1O14908 333 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 TIMM44O43615 452 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms