RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-238	ENST00000512620	PYGL	P06737	847 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	PDHA1	P08559	390 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	FAM163B	P0C2L3	166 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	ATXN1L	P0C7T5	689 aa	Known RBP	4	□□□□□ -1.77
CAST-238	ENST00000512620	HGF	P14210	728 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	PECAM1	P16284	738 aa	Predicted RBP	4	□□□□□ -1.77
CAST-238	ENST00000512620	ITGAL	P20701	1170 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	TNFAIP3	P21580	790 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	GABRB3	P28472	473 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	ADORA2A	P29274	412 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	NTSR1	P30989	418 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	ATIC	P31939	592 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	VIPR2	P41587	438 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	CPT1A	P50416	773 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	PAPOLA	P51003	745 aa	Known RBP	4	□□□□□ -1.77
CAST-238	ENST00000512620	SP2	Q02086	613 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	FPGS	Q05932	587 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	TCF15	Q12870	199 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	INSC	Q1MX18	579 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	MGAT5B	Q3V5L5	792 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	RBM20	Q5T481	1227 aa	Known RBP	4	□□□□□ -1.77
CAST-238	ENST00000512620	ZKSCAN2	Q63HK3	967 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	NAIF1	Q69YI7	327 aa	Predicted RBP	4	□□□□□ -1.77
CAST-238	ENST00000512620	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4	□□□□□ -1.77
CAST-238	ENST00000512620	JMJD6	Q6NYC1	403 aa	Predicted RBP	4	□□□□□ -1.77
CAST-238	ENST00000512620	KLHL17	Q6TDP4	642 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	SUGP1	Q8IWZ8	645 aa	Known RBP	4	□□□□□ -1.77
CAST-238	ENST00000512620	FTSJ3	Q8IY81	847 aa	Known RBP	4	□□□□□ -1.77
CAST-238	ENST00000512620	ADGRG5	Q8IZF4	528 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620		Q8NA96	180 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	DNAJB14	Q8TBM8	379 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	POC1B	Q8TC44	478 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	SPPL3	Q8TCT6	385 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	NACC2	Q96BF6	587 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	ZBTB45	Q96K62	511 aa	Predicted RBP	4	□□□□□ -1.77
CAST-238	ENST00000512620	TEPSIN	Q96N21	525 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	PRPF18	Q99633	342 aa	Known RBP	4	□□□□□ -1.77
CAST-238	ENST00000512620	GDF15	Q99988	308 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	PYM1	Q9BRP8	204 aa	Known RBP	4	□□□□□ -1.77
CAST-238	ENST00000512620	KATNAL1	Q9BW62	490 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	CCDC94	Q9BW85	323 aa	Predicted RBP	4	□□□□□ -1.77
CAST-238	ENST00000512620	SLC26A6	Q9BXS9	759 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	PCDHAC1	Q9H158	963 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	DHX36	Q9H2U1	1008 aa	Known RBP	4	□□□□□ -1.77
CAST-238	ENST00000512620	TMPRSS5	Q9H3S3	457 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	CXorf36	Q9H7Y0	433 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	GBA2	Q9HCG7	927 aa	Predicted RBP	4	□□□□□ -1.77
CAST-238	ENST00000512620	CD248	Q9HCU0	757 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	RASSF1	Q9NS23	344 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	RNF181	Q9P0P0	153 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	KIF17	Q9P2E2	1029 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	HERC5	Q9UII4	1024 aa	Known RBP	4	□□□□□ -1.77
CAST-238	ENST00000512620	SERTAD3	Q9UJW9	196 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	SLC13A4	Q9UKG4	626 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	4	□□□□□ -1.77
CAST-238	ENST00000512620	TNN	Q9UQP3	1299 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	TMEM98	Q9Y2Y6	226 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	CDY1	Q9Y6F8	540 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	KIF1B	O60333	1816 aa		4	□□□□□ -1.77
CAST-238	ENST00000512620	ADGRL1	O94910	1474 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	ITIH6	Q6UXX5	1313 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	NEURL4	Q96JN8	1562 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	IPO5	O00410	1097 aa	Known RBP	3.99	□□□□□ -1.77
CAST-238	ENST00000512620	CYP27B1	O15528	508 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	ASNA1	O43681	348 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	MBD4	O95243	580 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	NDUFA10	O95299	355 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	BAG4	O95429	457 aa	Known RBP	3.99	□□□□□ -1.77
CAST-238	ENST00000512620	VNN1	O95497	513 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	GLP2R	O95838	553 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	GYS1	P13807	737 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	EGR1	P18146	543 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	KRT9	P35527	623 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	NPTX2	P47972	431 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	NDUFV1	P49821	464 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	LOXL3	P58215	753 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	CXADR	P78310	365 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	MYO1E	Q12965	1108 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	REST	Q13127	1097 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	G3BP1	Q13283	466 aa	Known RBP eCLIP	3.99	□□□□□ -1.77
CAST-238	ENST00000512620	PDE1C	Q14123	709 aa	Predicted RBP	3.99	□□□□□ -1.77
CAST-238	ENST00000512620	EFR3A	Q14156	821 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	NPY5R	Q15761	445 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	MAPKAPK3	Q16644	382 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	ZXDC	Q2QGD7	858 aa	Predicted RBP	3.99	□□□□□ -1.77
CAST-238	ENST00000512620	ZSCAN23	Q3MJ62	389 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	SPATS1	Q496A3	300 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	RABL3	Q5HYI8	236 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	TMTC4	Q5T4D3	741 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	DEPDC1	Q5TB30	811 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	TAF3	Q5VWG9	929 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	FAAH2	Q6GMR7	532 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	RETSAT	Q6NUM9	610 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	HTR3D	Q70Z44	454 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	CLNK	Q7Z7G1	428 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	LRRTM4	Q86VH4	590 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	C2CD5	Q86YS7	1000 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	CCDC117	Q8IWD4	279 aa	Predicted RBP	3.99	□□□□□ -1.77
CAST-238	ENST00000512620	CCDC28A	Q8IWP9	274 aa		3.99	□□□□□ -1.77
CAST-238	ENST00000512620	TMEM132C	Q8N3T6	1108 aa		3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms