RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 RDXP35241 583 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 BPIFB4P59827 614 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 FAM193AP78312 1265 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 APBA1Q02410 837 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 PTK2Q05397 1052 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 TWF1Q12792 350 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 KIF5AQ12840 1032 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 NAB2Q15742 525 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 TMEM132AQ24JP5 1023 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 SGSM1Q2NKQ1 1148 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 SEZ6Q53EL9 994 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 TDRD12Q587J7 1177 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 STXBP5Q5T5C0 1151 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 ANKS3Q6ZW76 656 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 TRAPPC11Q7Z392 1133 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 ZNF571Q7Z3V5 609 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 CYP2U1Q7Z449 544 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 ARHGEF19Q8IW93 802 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 TMEM130Q8N3G9 435 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 TTC39CQ8N584 583 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 UBR7Q8N806 425 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 ACRBPQ8NEB7 543 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 CXorf38Q8TB03 319 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 PIGKQ92643 395 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 E2F7Q96AV8 911 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 CRELD1Q96HD1 420 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 LRRC3BQ96PB8 259 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 TMEM209Q96SK2 561 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 DESI2Q9BSY9 194 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 CCDC94Q9BW85 323 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 IMPG2Q9BZV3 1241 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 CCDC86Q9H6F5 360 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 UBE2TQ9NPD8 197 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 TOPORSQ9NS56 1045 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 CACNA2D2Q9NY47 1150 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 NAGPAQ9UK23 515 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 RAXQ9Y2V3 346 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 PCDHA13Q9Y5I0 950 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 BACE2Q9Y5Z0 518 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 ANK1P16157 1881 aa11.1□□□□□ -0.63
PDLIM5-217ENST00000512274 NBEAQ8NFP9 2946 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 WDFY3Q8IZQ1 3526 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 A0A087X0T9 212 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 A0A1W2PRU2 124 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 ANO9A1A5B4 782 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 FOXN3O00409 490 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 ATG13O75143 517 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 RNF40O75150 1001 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 B3GAT3O94766 335 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 ABLIM3O94929 683 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 PLEKP08567 350 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 FAM228BP0C875 321 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 ATF2P15336 505 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 TNFSF9P41273 254 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 MATR3P43243 847 aaKnown RBP eCLIP11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 DHPSP49366 369 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 DGKEP52429 567 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 FCHO2Q0JRZ9 810 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 CUL2Q13617 745 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 NCOA4Q13772 614 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 ZBTB6Q15916 424 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 SLC10A6Q3KNW5 377 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 FSTL4Q6MZW2 842 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 ALKAL1Q6UXT8 129 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 ARID3BQ8IVW6 561 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 EFCAB13Q8IY85 973 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 TCEAL8Q8IYN2 117 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 CAMKK1Q8N5S9 505 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 CEP120Q8N960 986 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 SHKBP1Q8TBC3 707 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 ANKRD36BP1Q96IX9 119 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 ACAP3Q96P50 834 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 TPSD1Q9BZJ3 242 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 XYLT2Q9H1B5 865 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 ASAH2Q9NR71 780 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 CNTN3Q9P232 1028 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 ITGA11Q9UKX5 1188 aa11.09□□□□□ -0.63
PDLIM5-217ENST00000512274 DMXL2Q8TDJ6 3036 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 FAM221BA6H8Z2 402 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 EGFP01133 1207 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 TNNC2P02585 160 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 TMEM191BP0C7N4 346 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 KCNE1P15382 129 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 CYP3A5P20815 502 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 ACO1P21399 889 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 BCKDHBP21953 392 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 PIK3CAP42336 1068 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 CLCNKBP51801 687 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 ZNF132P52740 706 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 HADHBP55084 474 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 OSTNP61366 133 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 YWHAEP62258 255 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 NOP14P78316 857 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 BIRC3Q13489 604 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 TRIM61Q5EBN2 209 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 GLRA4Q5JXX5 417 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 PMS2CLQ68D20 193 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 ALKBH5Q6P6C2 394 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 GJB7Q6PEY0 223 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 CD300LGQ6UXG3 332 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms