RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 NR1I3Q14994 352 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 ARHGAP44Q17R89 818 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 EXOSC6Q5RKV6 272 aaKnown RBP10.02□□□□□ -0.81
SNF8-211ENST00000512243 KLHDC7AQ5VTJ3 777 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 GJB7Q6PEY0 223 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 LNX1Q8TBB1 728 aaPredicted RBP10.02□□□□□ -0.81
SNF8-211ENST00000512243 KAT5Q92993 513 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 FAM161BQ96MY7 647 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 SYT15Q9BQS2 421 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 RBCK1Q9BYM8 510 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 GANQ9H2C0 597 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 CISHQ9NSE2 258 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 FNIP2Q9P278 1114 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 BARX2Q9UMQ3 279 aaPredicted RBP10.02□□□□□ -0.81
SNF8-211ENST00000512243 PCDHB4Q9Y5E5 795 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 PCDHGC5Q9Y5F6 944 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 BACE2Q9Y5Z0 518 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 FHOD1Q9Y613 1164 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 SZT2Q5T011 3432 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 PATJQ8NI35 1801 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 C2orf71A6NGG8 1288 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 GABRDO14764 452 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 CILPO75339 1184 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 MED26O95402 600 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 PDGFRBP09619 1106 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 KRT5P13647 590 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 UCHL3P15374 230 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 RPL17P18621 184 aaKnown RBP10.01□□□□□ -0.81
SNF8-211ENST00000512243 ACAT1P24752 427 aaKnown RBP10.01□□□□□ -0.81
SNF8-211ENST00000512243 NDUFV1P49821 464 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 NDST1P52848 882 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 POLR2FP61218 127 aaKnown RBP10.01□□□□□ -0.81
SNF8-211ENST00000512243 APBA1Q02410 837 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 CAMK1Q14012 370 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 PTPN21Q16825 1174 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 IQCEQ6IPM2 695 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 CACNA2D4Q7Z3S7 1137 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 UNC93AQ86WB7 457 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 DCP1BQ8IZD4 617 aaKnown RBP10.01□□□□□ -0.81
SNF8-211ENST00000512243 MRPL43Q8N983 215 aaKnown RBP10.01□□□□□ -0.81
SNF8-211ENST00000512243 OR10T2Q8NGX3 314 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 JAKMIP2Q96AA8 810 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 TNIP3Q96KP6 325 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 DMRTB1Q96MA1 342 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 KREMEN1Q96MU8 473 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 ACBD6Q9BR61 282 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 NT5C1AQ9BXI3 368 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 NSUN3Q9H649 340 aaKnown RBP10.01□□□□□ -0.81
SNF8-211ENST00000512243 RXFP1Q9HBX9 757 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 ABCB6Q9NP58 842 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 LMCD1Q9NZU5 365 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 CEP72Q9P209 647 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 FBXL5Q9UKA1 691 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 DNAJC12Q9UKB3 198 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 CDH9Q9ULB4 789 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 IRAK3Q9Y616 596 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 CDY1Q9Y6F8 540 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 ITIH6Q6UXX5 1313 aa10.01□□□□□ -0.81
SNF8-211ENST00000512243 MYO16Q9Y6X6 1858 aa10□□□□□ -0.81
SNF8-211ENST00000512243 FSD2A1L4K1 749 aa10□□□□□ -0.81
SNF8-211ENST00000512243 HIDE1A8MVS5 230 aa10□□□□□ -0.81
SNF8-211ENST00000512243 TEX28O15482 410 aa10□□□□□ -0.81
SNF8-211ENST00000512243 HCRTO43612 131 aa10□□□□□ -0.81
SNF8-211ENST00000512243 TBC1D4O60343 1298 aa10□□□□□ -0.81
SNF8-211ENST00000512243 NOL4O94818 638 aa10□□□□□ -0.81
SNF8-211ENST00000512243 ECEL1O95672 775 aa10□□□□□ -0.81
SNF8-211ENST00000512243 CNPP09543 421 aaKnown RBP10□□□□□ -0.81
SNF8-211ENST00000512243 KLRC2P26717 231 aa10□□□□□ -0.81
SNF8-211ENST00000512243 PBX1P40424 430 aa10□□□□□ -0.81
SNF8-211ENST00000512243 USP8P40818 1118 aa10□□□□□ -0.81
SNF8-211ENST00000512243 CD97P48960 835 aa10□□□□□ -0.81
SNF8-211ENST00000512243 FXR1P51114 621 aaKnown RBP eCLIP10□□□□□ -0.81
SNF8-211ENST00000512243 ZNF75DP51815 510 aa10□□□□□ -0.81
SNF8-211ENST00000512243 ARPP19P56211 112 aa10□□□□□ -0.81
SNF8-211ENST00000512243 PSMC1P62191 440 aaKnown RBP10□□□□□ -0.81
SNF8-211ENST00000512243 ROR1Q01973 937 aa10□□□□□ -0.81
SNF8-211ENST00000512243 TRIM14Q14142 442 aa10□□□□□ -0.81
SNF8-211ENST00000512243 POU4F3Q15319 338 aa10□□□□□ -0.81
SNF8-211ENST00000512243 MAPRE1Q15691 268 aaKnown RBP10□□□□□ -0.81
SNF8-211ENST00000512243 ZNF394Q53GI3 561 aa10□□□□□ -0.81
SNF8-211ENST00000512243 SLC8B1Q6J4K2 584 aa10□□□□□ -0.81
SNF8-211ENST00000512243 DPY19L2P1Q6NXN4 242 aa10□□□□□ -0.81
SNF8-211ENST00000512243 TMEM270Q6UE05 265 aa10□□□□□ -0.81
SNF8-211ENST00000512243 Q7L0L9 218 aa10□□□□□ -0.81
SNF8-211ENST00000512243 PPFIBP1Q86W92 1011 aa10□□□□□ -0.81
SNF8-211ENST00000512243 DEFB123Q8N688 67 aa10□□□□□ -0.81
SNF8-211ENST00000512243 UBR7Q8N806 425 aa10□□□□□ -0.81
SNF8-211ENST00000512243 RBBP8NLQ8NC74 664 aaPredicted RBP10□□□□□ -0.81
SNF8-211ENST00000512243 B3GALNT2Q8NCR0 500 aa10□□□□□ -0.81
SNF8-211ENST00000512243 SHKBP1Q8TBC3 707 aa10□□□□□ -0.81
SNF8-211ENST00000512243 EPS8L3Q8TE67 593 aaKnown RBP10□□□□□ -0.81
SNF8-211ENST00000512243 IQCDQ96DY2 449 aa10□□□□□ -0.81
SNF8-211ENST00000512243 KLHL5Q96PQ7 755 aa10□□□□□ -0.81
SNF8-211ENST00000512243 SPAG5Q96R06 1193 aa10□□□□□ -0.81
SNF8-211ENST00000512243 TMEM209Q96SK2 561 aa10□□□□□ -0.81
SNF8-211ENST00000512243 CDCA3Q99618 268 aaPredicted RBP10□□□□□ -0.81
SNF8-211ENST00000512243 RTP3Q9BQQ7 232 aa10□□□□□ -0.81
SNF8-211ENST00000512243 TRIM56Q9BRZ2 755 aaKnown RBP10□□□□□ -0.81
SNF8-211ENST00000512243 NUP58Q9BVL2 599 aa10□□□□□ -0.81
SNF8-211ENST00000512243 ZCWPW1Q9H0M4 648 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms