RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 EHD2Q9NZN4 543 aa20.19■□□□□ 0.82
HMGCS1-206ENST00000511774 EXOC7Q9UPT5 735 aa20.19■□□□□ 0.82
HMGCS1-206ENST00000511774 SH3BP1Q9Y3L3 701 aa20.19■□□□□ 0.82
HMGCS1-206ENST00000511774 MGAQ8IWI9 3026 aa20.19■□□□□ 0.82
HMGCS1-206ENST00000511774 A0A1B0GTW7 788 aa20.18■□□□□ 0.82
HMGCS1-206ENST00000511774 FAM149AA5PLN7 773 aa20.18■□□□□ 0.82
HMGCS1-206ENST00000511774 CACNG3O60359 315 aa20.18■□□□□ 0.82
HMGCS1-206ENST00000511774 CILPO75339 1184 aa20.18■□□□□ 0.82
HMGCS1-206ENST00000511774 CST3P01034 146 aaPredicted RBP20.18■□□□□ 0.82
HMGCS1-206ENST00000511774 LONP1P36776 959 aaKnown RBP20.18■□□□□ 0.82
HMGCS1-206ENST00000511774 HECTD3Q5T447 861 aa20.18■□□□□ 0.82
HMGCS1-206ENST00000511774 SYCP2LQ5T4T6 812 aa20.18■□□□□ 0.82
HMGCS1-206ENST00000511774 NUP93Q8N1F7 819 aa20.18■□□□□ 0.82
HMGCS1-206ENST00000511774 FOXJ1Q92949 421 aa20.18■□□□□ 0.82
HMGCS1-206ENST00000511774 TOE1Q96GM8 510 aaKnown RBP20.18■□□□□ 0.82
HMGCS1-206ENST00000511774 DUSP9Q99956 384 aaKnown RBP20.18■□□□□ 0.82
HMGCS1-206ENST00000511774 ZDHHC5Q9C0B5 715 aa20.18■□□□□ 0.82
HMGCS1-206ENST00000511774 PRDM16Q9HAZ2 1276 aa20.18■□□□□ 0.82
HMGCS1-206ENST00000511774 WSB2Q9NYS7 404 aaPredicted RBP20.18■□□□□ 0.82
HMGCS1-206ENST00000511774 GMIPQ9P107 970 aa20.18■□□□□ 0.82
HMGCS1-206ENST00000511774 SEL1LQ9UBV2 794 aa20.18■□□□□ 0.82
HMGCS1-206ENST00000511774 A0A087WV48 116 aa20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 CYSRT1A8MQ03 144 aa20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 NEDD8-MDP1E9PL57 170 aa20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 PRPF6O94906 941 aaKnown RBP20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 CISD3P0C7P0 127 aa20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 ZDHHC11BP0C7U3 371 aa20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 GNSP15586 552 aa20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 CD6P30203 668 aa20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 WDR45BQ5MNZ6 344 aa20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 SNX30Q5VWJ9 437 aa20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 DBX2Q6ZNG2 339 aa20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 PAQR9Q6ZVX9 377 aa20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 GPD1LQ8N335 351 aa20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 OR6B3Q8NGW1 331 aa20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 GPR174Q9BXC1 333 aa20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 ELOVL4Q9GZR5 314 aa20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 MKRN2Q9H000 416 aaKnown RBP20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 TM7SF3Q9NS93 570 aa20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 IL37Q9NZH6 218 aa20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 USP36Q9P275 1121 aaKnown RBP20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 CKAP5Q14008 2032 aa20.17■□□□□ 0.82
HMGCS1-206ENST00000511774 EIF4E1BA6NMX2 242 aaKnown RBP20.16■□□□□ 0.82
HMGCS1-206ENST00000511774 GOLGA8CPA6NN73 597 aa20.16■□□□□ 0.82
HMGCS1-206ENST00000511774 TACC1O75410 805 aa20.16■□□□□ 0.82
HMGCS1-206ENST00000511774 TBX18O95935 607 aa20.16■□□□□ 0.82
HMGCS1-206ENST00000511774 NCAM1P13591 858 aa20.16■□□□□ 0.82
HMGCS1-206ENST00000511774 TYRP14679 529 aa20.16■□□□□ 0.82
HMGCS1-206ENST00000511774 HLA-BQ31612 363 aa20.16■□□□□ 0.82
HMGCS1-206ENST00000511774 FUT11Q495W5 492 aa20.16■□□□□ 0.82
HMGCS1-206ENST00000511774 TPGS1Q6ZTW0 290 aa20.16■□□□□ 0.82
HMGCS1-206ENST00000511774 TRAPPC11Q7Z392 1133 aa20.16■□□□□ 0.82
HMGCS1-206ENST00000511774 SYCP3Q8IZU3 236 aa20.16■□□□□ 0.82
HMGCS1-206ENST00000511774 C1orf216Q8TAB5 229 aa20.16■□□□□ 0.82
HMGCS1-206ENST00000511774 OVCA2Q8WZ82 227 aa20.16■□□□□ 0.82
HMGCS1-206ENST00000511774 MIR1-1HGQ9H1L0 117 aa20.16■□□□□ 0.82
HMGCS1-206ENST00000511774 SNX25Q9H3E2 840 aa20.16■□□□□ 0.82
HMGCS1-206ENST00000511774 OLFML3Q9NRN5 406 aa20.16■□□□□ 0.82
HMGCS1-206ENST00000511774 ATMQ13315 3056 aa20.15■□□□□ 0.82
HMGCS1-206ENST00000511774 MEI4A8MW99 385 aa20.15■□□□□ 0.82
HMGCS1-206ENST00000511774 TNNC2P02585 160 aa20.15■□□□□ 0.82
HMGCS1-206ENST00000511774 ZNF883P0CG24 379 aa20.15■□□□□ 0.82
HMGCS1-206ENST00000511774 GAP43P17677 238 aa20.15■□□□□ 0.82
HMGCS1-206ENST00000511774 SLC5A3P53794 718 aa20.15■□□□□ 0.82
HMGCS1-206ENST00000511774 DUOXA2Q1HG44 320 aa20.15■□□□□ 0.82
HMGCS1-206ENST00000511774 PREPLQ4J6C6 727 aaPredicted RBP20.15■□□□□ 0.82
HMGCS1-206ENST00000511774 HTR3DQ70Z44 454 aa20.15■□□□□ 0.82
HMGCS1-206ENST00000511774 SCUBE3Q8IX30 993 aa20.15■□□□□ 0.82
HMGCS1-206ENST00000511774 B3GALNT2Q8NCR0 500 aa20.15■□□□□ 0.82
HMGCS1-206ENST00000511774 PDZD8Q8NEN9 1154 aa20.15■□□□□ 0.82
HMGCS1-206ENST00000511774 BBS2Q9BXC9 721 aa20.15■□□□□ 0.82
HMGCS1-206ENST00000511774 MUC22E2RYF6 1773 aaPredicted RBP20.15■□□□□ 0.82
HMGCS1-206ENST00000511774 FAM92AA1XBS5 289 aa20.14■□□□□ 0.81
HMGCS1-206ENST00000511774 RTN3O95197 1032 aaPredicted RBP20.14■□□□□ 0.81
HMGCS1-206ENST00000511774 HOXD13P35453 343 aa20.14■□□□□ 0.81
HMGCS1-206ENST00000511774 MATKP42679 507 aa20.14■□□□□ 0.81
HMGCS1-206ENST00000511774 DCAF12L1Q5VU92 463 aa20.14■□□□□ 0.81
HMGCS1-206ENST00000511774 SDE2Q6IQ49 451 aa20.14■□□□□ 0.81
HMGCS1-206ENST00000511774 RHBDD1Q8TEB9 315 aa20.14■□□□□ 0.81
HMGCS1-206ENST00000511774 SCFD1Q8WVM8 642 aa20.14■□□□□ 0.81
HMGCS1-206ENST00000511774 BHMTQ93088 406 aa20.14■□□□□ 0.81
HMGCS1-206ENST00000511774 KLF16Q9BXK1 252 aaPredicted RBP20.14■□□□□ 0.81
HMGCS1-206ENST00000511774 GZF1Q9H116 711 aaPredicted RBP20.14■□□□□ 0.81
HMGCS1-206ENST00000511774 ITM2CQ9NQX7 267 aa20.14■□□□□ 0.81
HMGCS1-206ENST00000511774 MARK1Q9P0L2 795 aa20.14■□□□□ 0.81
HMGCS1-206ENST00000511774 NFE2L3Q9Y4A8 694 aa20.14■□□□□ 0.81
HMGCS1-206ENST00000511774 PCDHB13Q9Y5F0 798 aa20.14■□□□□ 0.81
HMGCS1-206ENST00000511774 STON1Q9Y6Q2 735 aa20.14■□□□□ 0.81
HMGCS1-206ENST00000511774 A0A1B0GVT2 93 aa20.13■□□□□ 0.81
HMGCS1-206ENST00000511774 FRMD3A2A2Y4 597 aa20.13■□□□□ 0.81
HMGCS1-206ENST00000511774 BCAT2O15382 392 aaPredicted RBP20.13■□□□□ 0.81
HMGCS1-206ENST00000511774 ZBTB24O43167 697 aaPredicted RBP20.13■□□□□ 0.81
HMGCS1-206ENST00000511774 ITPKBP27987 946 aa20.13■□□□□ 0.81
HMGCS1-206ENST00000511774 GJB2P29033 226 aa20.13■□□□□ 0.81
HMGCS1-206ENST00000511774 TUBP50607 506 aa20.13■□□□□ 0.81
HMGCS1-206ENST00000511774 SF3A1Q15459 793 aaKnown RBP20.13■□□□□ 0.81
HMGCS1-206ENST00000511774 NUDT18Q6ZVK8 323 aa20.13■□□□□ 0.81
HMGCS1-206ENST00000511774 METTL3Q86U44 580 aaKnown RBP20.13■□□□□ 0.81
HMGCS1-206ENST00000511774 FAM35AQ86V20 835 aa20.13■□□□□ 0.81
HMGCS1-206ENST00000511774 ZMIZ2Q8NF64 920 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms