RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 CCDC186Q7Z3E2 898 aa12.69□□□□□ -0.38
CHFR-208ENST00000511001 PIGZQ86VD9 579 aa12.69□□□□□ -0.38
CHFR-208ENST00000511001 ETFBKMTQ8IXQ9 262 aa12.69□□□□□ -0.38
CHFR-208ENST00000511001 ZNF276Q8N554 614 aa12.69□□□□□ -0.38
CHFR-208ENST00000511001 LMO3Q8TAP4 145 aa12.69□□□□□ -0.38
CHFR-208ENST00000511001 HHIPQ96QV1 700 aa12.69□□□□□ -0.38
CHFR-208ENST00000511001 UBXN6Q9BZV1 441 aa12.69□□□□□ -0.38
CHFR-208ENST00000511001 NUDT5Q9UKK9 219 aa12.69□□□□□ -0.38
CHFR-208ENST00000511001 SLC8A2Q9UPR5 921 aa12.69□□□□□ -0.38
CHFR-208ENST00000511001 CEP192Q8TEP8 1941 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 ACACBO00763 2458 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 A0A0A0MRY4 1105 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 TULP2O00295 520 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 HOXC11O43248 304 aaPredicted RBP12.68□□□□□ -0.38
CHFR-208ENST00000511001 ADH1CP00326 375 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 ATP5C1P36542 298 aaKnown RBP12.68□□□□□ -0.38
CHFR-208ENST00000511001 STX17P56962 302 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 GAD2Q05329 585 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 LRMPQ12912 555 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 DMC1Q14565 340 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 CCDC40Q4G0X9 1142 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 KLHDC10Q6PID8 442 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 BHLHA9Q7RTU4 235 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 TMEM25Q86YD3 366 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 TRIM59Q8IWR1 403 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 CAMKK1Q8N5S9 505 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 ANKRD52Q8NB46 1076 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 GAB3Q8WWW8 586 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 KAT5Q92993 513 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 ACDQ96AP0 544 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 PNKPQ96T60 521 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 DNAI2Q9GZS0 605 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 SPHK2Q9NRA0 654 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 GMEB2Q9UKD1 530 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 TSPAN16Q9UKR8 245 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 RAB23Q9ULC3 237 aa12.68□□□□□ -0.38
CHFR-208ENST00000511001 KMT2BQ9UMN6 2715 aaPredicted RBP12.68□□□□□ -0.38
CHFR-208ENST00000511001 BICDL2A1A5D9 508 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 KAT7O95251 611 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 RETP07949 1114 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 HNRNPLP14866 589 aaKnown RBP eCLIP12.67□□□□□ -0.38
CHFR-208ENST00000511001 TBXAS1P24557 533 aaPredicted RBP12.67□□□□□ -0.38
CHFR-208ENST00000511001 PSEN1P49768 467 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 SEC13P55735 322 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 MARSP56192 900 aaKnown RBP12.67□□□□□ -0.38
CHFR-208ENST00000511001 UBE2HP62256 183 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 YWHAEP62258 255 aaKnown RBP12.67□□□□□ -0.38
CHFR-208ENST00000511001 KDSRQ06136 332 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 PDE4CQ08493 712 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 PAK1Q13153 545 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 PUM1Q14671 1186 aaKnown RBP eCLIP12.67□□□□□ -0.38
CHFR-208ENST00000511001 GOLGA7BQ2TAP0 167 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 C2orf27AQ580R0 203 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 EMC10Q5UCC4 262 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 Q6ZNB5 142 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 FAM160A2Q8N612 972 aaPredicted RBP12.67□□□□□ -0.38
CHFR-208ENST00000511001 NAT16Q8N8M0 369 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 P2RY11Q96G91 374 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 NT5C1BQ96P26 610 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 MED15Q96RN5 788 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 NACA2Q9H009 215 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 ARHGEF4Q9NR80 690 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 CLIC5Q9NZA1 410 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 CHMP5Q9NZZ3 219 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 DNMT3LQ9UJW3 386 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 NAGPAQ9UK23 515 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 MMP17Q9ULZ9 603 aa12.67□□□□□ -0.38
CHFR-208ENST00000511001 MAP1BP46821 2468 aaKnown RBP12.67□□□□□ -0.38
CHFR-208ENST00000511001 TNRC6BQ9UPQ9 1833 aaKnown RBP12.67□□□□□ -0.38
CHFR-208ENST00000511001 RNF225M0QZC1 329 aaPredicted RBP12.66□□□□□ -0.38
CHFR-208ENST00000511001 O00370 1275 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 XPO1O14980 1071 aaKnown RBP12.66□□□□□ -0.38
CHFR-208ENST00000511001 TRIM24O15164 1050 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 AXIN1O15169 862 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 P4HA2O15460 535 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 TULP3O75386 442 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 KRT37O76014 449 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 STC2O76061 302 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 APBB3O95704 486 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 APODP05090 189 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 VDRP11473 427 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 GRIA2P42262 883 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 KIR2DL1P43626 348 aaPredicted RBP12.66□□□□□ -0.38
CHFR-208ENST00000511001 PLA2G4AP47712 749 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 BCAT1P54687 386 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 MRPS21P82921 87 aaKnown RBP12.66□□□□□ -0.38
CHFR-208ENST00000511001 SPEM2Q0P670 501 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 KCNH2Q12809 1159 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 PKDCCQ504Y2 493 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 SGO2Q562F6 1265 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 C10orf120Q5SQS8 335 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 PM20D1Q6GTS8 502 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 TMEM92Q6UXU6 159 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 CEP68Q76N32 757 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 KBTBD6Q86V97 674 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 ARHGEF19Q8IW93 802 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 CCDC33Q8N5R6 958 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 GPR161Q8N6U8 529 aaKnown RBP12.66□□□□□ -0.38
CHFR-208ENST00000511001 TRIML1Q8N9V2 468 aa12.66□□□□□ -0.38
CHFR-208ENST00000511001 TFAP2BQ92481 460 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms