RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 CBWD3Q5JTY5 395 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 CBWD5Q5RIA9 395 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 TMCO4Q5TGY1 634 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 CHRDL2Q6WN34 429 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 TRMT11Q7Z4G4 463 aaKnown RBP5.32□□□□□ -1.56
PHF3-210ENST00000509876 KDELC2Q7Z4H8 507 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 MON1AQ86VX9 555 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 FAM131BQ86XD5 332 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 MYLK4Q86YV6 388 aaPredicted RBP5.32□□□□□ -1.56
PHF3-210ENST00000509876 OR5B17Q8NGF7 314 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 OMDQ99983 421 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.32□□□□□ -1.56
PHF3-210ENST00000509876 PAK5Q9P286 719 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 CFAP97Q9P2B7 532 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 CHORDC1Q9UHD1 332 aaPredicted RBP5.32□□□□□ -1.56
PHF3-210ENST00000509876 UBA6A0AVT1 1052 aaPredicted RBP5.32□□□□□ -1.56
PHF3-210ENST00000509876 KLRC4O43908 158 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 DAB1O75553 588 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 SOD2P04179 222 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 ERBB2P04626 1255 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 COMTP21964 271 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 MAP4P27816 1152 aaKnown RBP5.32□□□□□ -1.56
PHF3-210ENST00000509876 NSUN2Q08J23 767 aaKnown RBP eCLIP5.32□□□□□ -1.56
PHF3-210ENST00000509876 ACAP1Q15027 740 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 BRD3Q15059 726 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 RPS6KA2Q15349 733 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 PRSS55Q6UWB4 352 aaPredicted RBP5.32□□□□□ -1.56
PHF3-210ENST00000509876 C16orf59Q7L2K0 433 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 DENND1CQ8IV53 801 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 ATL2Q8NHH9 583 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 C2orf49Q9BVC5 232 aaPredicted RBP5.32□□□□□ -1.56
PHF3-210ENST00000509876 FAM107BQ9H098 131 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 THAP2Q9H0W7 228 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 SARS2Q9NP81 518 aaKnown RBP5.32□□□□□ -1.56
PHF3-210ENST00000509876 BAZ2AQ9UIF9 1905 aaKnown RBP5.32□□□□□ -1.56
PHF3-210ENST00000509876 FAM47DPA6NHR8 397 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 TBL1XO60907 577 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 PNMA6AP0CW24 399 aaPredicted RBP5.32□□□□□ -1.56
PHF3-210ENST00000509876 SMAD3P84022 425 aaKnown RBP5.32□□□□□ -1.56
PHF3-210ENST00000509876 SULT2A1Q06520 285 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 FAM46CQ5VWP2 391 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 TRIM42Q8IWZ5 723 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 SCUBE3Q8IX30 993 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 TTC30BQ8N4P2 665 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 POF1BQ8WVV4 589 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 IRGQQ8WZA9 623 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 FAXDC2Q96IV6 333 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 DNAJC7Q99615 494 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 BBS2Q9BXC9 721 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 KCTD10Q9H3F6 313 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 SAYSD1Q9NPB0 183 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 CNGB3Q9NQW8 809 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 MAN1C1Q9NR34 630 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 DUS2Q9NX74 493 aaKnown RBP5.32□□□□□ -1.56
PHF3-210ENST00000509876 HACD3Q9P035 362 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 VPS9D1Q9Y2B5 631 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 ADGRG1Q9Y653 693 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 RREB1Q92766 1687 aa5.32□□□□□ -1.56
PHF3-210ENST00000509876 FAM187AA6NFU0 413 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 M0R2N6 131 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 SMAPO00193 183 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 TTI1O43156 1089 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 PIGRP01833 764 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 HPDP32754 393 aaPredicted RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 GRSF1Q12849 480 aaKnown RBP eCLIP5.31□□□□□ -1.56
PHF3-210ENST00000509876 DHX34Q14147 1143 aaKnown RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 TARBP2Q15633 366 aaKnown RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 KLHL38Q2WGJ6 581 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 KIAA1324Q6UXG2 1013 aaKnown RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 RBM43Q6ZSC3 357 aaKnown RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 MCOLN2Q8IZK6 566 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 SLC25A41Q8N5S1 370 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 CALML6Q8TD86 181 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 SLC20A1Q8WUM9 679 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 WNT8BQ93098 351 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 ZNF333Q96JL9 665 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 CDCA3Q99618 268 aaPredicted RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 NTPCRQ9BSD7 190 aaKnown RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 DRC3Q9H069 523 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 EPB41L5Q9HCM4 733 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 E5RJQ4 531 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 INPPL1O15357 1258 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 TLR5O60602 858 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 GYPCP04921 128 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 TGM2P21980 687 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 ARSEP51690 589 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 PHEXP78562 749 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 APBA1Q02410 837 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 MPPE1Q53F39 396 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 OOSP2Q86WS3 158 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 IPMKQ8NFU5 416 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 SUSD3Q96L08 255 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 OSBPL9Q96SU4 736 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 DUSP9Q99956 384 aaKnown RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 TKTL2Q9H0I9 626 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 LMAN2LQ9H0V9 348 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 NSMCE4AQ9NXX6 385 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 SLC38A8A6NNN8 435 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 MEI4A8MW99 385 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 RBAK-RBAKDNI3L0D1 243 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms