RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 SLC23A3Q6PIS1 610 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 HTR3DQ70Z44 454 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 LPCAT2Q7L5N7 544 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 C11orf74Q86VG3 221 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 SYT12Q8IV01 421 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 ZNF513Q8N8E2 541 aaPredicted RBP16.85■□□□□ 0.29
RAB40C-202ENST00000509637 TERB1Q8NA31 727 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 KDF1Q8NAX2 398 aaPredicted RBP16.85■□□□□ 0.29
RAB40C-202ENST00000509637 CCDC26Q8TAB7 109 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 SLC2A14Q8TDB8 520 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 DUSP9Q99956 384 aaKnown RBP16.85■□□□□ 0.29
RAB40C-202ENST00000509637 MED10Q9BTT4 135 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 LRRC27Q9C0I9 530 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 APOBEC3GQ9HC16 384 aaKnown RBP16.85■□□□□ 0.29
RAB40C-202ENST00000509637 POLMQ9NP87 494 aaPredicted RBP16.85■□□□□ 0.29
RAB40C-202ENST00000509637 DMAP1Q9NPF5 467 aaPredicted RBP16.85■□□□□ 0.29
RAB40C-202ENST00000509637 FAM49BQ9NUQ9 324 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 EHD2Q9NZN4 543 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 CALCOCO1Q9P1Z2 691 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 MYH10P35580 1976 aa16.85■□□□□ 0.29
RAB40C-202ENST00000509637 CACNA1GO43497 2377 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 IGHV1OR15-9A0A0B4J2B8 117 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 PVALEFA0A1B0GWK0 134 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 ACTN4O43707 911 aaKnown RBP16.84■□□□□ 0.29
RAB40C-202ENST00000509637 HYAL3O43820 417 aaPredicted RBP16.84■□□□□ 0.29
RAB40C-202ENST00000509637 PHACTR2O75167 634 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 ALDH1A2O94788 518 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 ASPAP45381 313 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 TUBP50607 506 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 AMPD3Q01432 767 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 SEMA3BQ13214 749 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 BIRC3Q13489 604 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 ANO4Q32M45 955 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 ZACNQ401N2 412 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 C10orf76Q5T2E6 689 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 RESP18Q5W5W9 173 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 SV2AQ7L0J3 742 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 SCD5Q86SK9 330 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 DDX42Q86XP3 938 aaKnown RBP eCLIP16.84■□□□□ 0.29
RAB40C-202ENST00000509637 PDZD8Q8NEN9 1154 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 OTUB2Q96DC9 234 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 SMARCD1Q96GM5 515 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 CAPN10Q9HC96 672 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 DEC1Q9P2X7 70 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 SH3BP1Q9Y3L3 701 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 STARD13Q9Y3M8 1113 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 RAD54BQ9Y620 910 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 ZZEF1O43149 2961 aa16.84■□□□□ 0.29
RAB40C-202ENST00000509637 CYP26A1O43174 497 aa16.83■□□□□ 0.28
RAB40C-202ENST00000509637 MAP3K13O43283 966 aa16.83■□□□□ 0.28
RAB40C-202ENST00000509637 TLR5O60602 858 aa16.83■□□□□ 0.28
RAB40C-202ENST00000509637 KLKB1P03952 638 aa16.83■□□□□ 0.28
RAB40C-202ENST00000509637 NDUFV2P19404 249 aa16.83■□□□□ 0.28
RAB40C-202ENST00000509637 TPGS1Q6ZTW0 290 aa16.83■□□□□ 0.28
RAB40C-202ENST00000509637 CLEC20AQ6ZU45 233 aa16.83■□□□□ 0.28
RAB40C-202ENST00000509637 PGBD3Q8N328 593 aa16.83■□□□□ 0.28
RAB40C-202ENST00000509637 ADAM33Q9BZ11 813 aa16.83■□□□□ 0.28
RAB40C-202ENST00000509637 BCCIPQ9P287 314 aaKnown RBP eCLIP16.83■□□□□ 0.28
RAB40C-202ENST00000509637 KLK13Q9UKR3 277 aa16.83■□□□□ 0.28
RAB40C-202ENST00000509637 ASS1P00966 412 aaKnown RBP16.82■□□□□ 0.28
RAB40C-202ENST00000509637 CAPNS1P04632 268 aa16.82■□□□□ 0.28
RAB40C-202ENST00000509637 CD59P13987 128 aa16.82■□□□□ 0.28
RAB40C-202ENST00000509637 HOXB2P14652 356 aa16.82■□□□□ 0.28
RAB40C-202ENST00000509637 ADORA2BP29275 332 aa16.82■□□□□ 0.28
RAB40C-202ENST00000509637 NTSR1P30989 418 aa16.82■□□□□ 0.28
RAB40C-202ENST00000509637 KMT5BQ4FZB7 885 aa16.82■□□□□ 0.28
RAB40C-202ENST00000509637 LYSMD4Q5XG99 296 aa16.82■□□□□ 0.28
RAB40C-202ENST00000509637 Q6ZNB5 142 aa16.82■□□□□ 0.28
RAB40C-202ENST00000509637 SLC9A9Q8IVB4 645 aa16.82■□□□□ 0.28
RAB40C-202ENST00000509637 IPO4Q8TEX9 1081 aaKnown RBP16.82■□□□□ 0.28
RAB40C-202ENST00000509637 JAKMIP2Q96AA8 810 aa16.82■□□□□ 0.28
RAB40C-202ENST00000509637 PAGE5Q96GU1 130 aa16.82■□□□□ 0.28
RAB40C-202ENST00000509637 ZNF396Q96N95 335 aaPredicted RBP16.82■□□□□ 0.28
RAB40C-202ENST00000509637 BACH2Q9BYV9 841 aa16.82■□□□□ 0.28
RAB40C-202ENST00000509637 CYLDQ9NQC7 956 aa16.82■□□□□ 0.28
RAB40C-202ENST00000509637 DNAJC17Q9NVM6 304 aaKnown RBP16.82■□□□□ 0.28
RAB40C-202ENST00000509637 COMMD8Q9NX08 183 aa16.82■□□□□ 0.28
RAB40C-202ENST00000509637 PLK2Q9NYY3 685 aa16.82■□□□□ 0.28
RAB40C-202ENST00000509637 FBXO10Q9UK96 956 aa16.82■□□□□ 0.28
RAB40C-202ENST00000509637 CLEC4EQ9ULY5 219 aa16.82■□□□□ 0.28
RAB40C-202ENST00000509637 SPEGQ15772 3267 aa16.82■□□□□ 0.28
RAB40C-202ENST00000509637 A0A1W2PQH9 124 aa16.81■□□□□ 0.28
RAB40C-202ENST00000509637 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.81■□□□□ 0.28
RAB40C-202ENST00000509637 TAF4O00268 1085 aa16.81■□□□□ 0.28
RAB40C-202ENST00000509637 CACNG3O60359 315 aa16.81■□□□□ 0.28
RAB40C-202ENST00000509637 HLA-DRAP01903 254 aa16.81■□□□□ 0.28
RAB40C-202ENST00000509637 TYRP14679 529 aa16.81■□□□□ 0.28
RAB40C-202ENST00000509637 RPL6Q02878 288 aaKnown RBP16.81■□□□□ 0.28
RAB40C-202ENST00000509637 ZNF33AQ06730 810 aa16.81■□□□□ 0.28
RAB40C-202ENST00000509637 PPP3CAQ08209 521 aa16.81■□□□□ 0.28
RAB40C-202ENST00000509637 TMEM174Q8WUU8 243 aa16.81■□□□□ 0.28
RAB40C-202ENST00000509637 TNIP3Q96KP6 325 aa16.81■□□□□ 0.28
RAB40C-202ENST00000509637 CAMK1GQ96NX5 476 aa16.81■□□□□ 0.28
RAB40C-202ENST00000509637 CACNA2D2Q9NY47 1150 aa16.81■□□□□ 0.28
RAB40C-202ENST00000509637 MARK1Q9P0L2 795 aa16.81■□□□□ 0.28
RAB40C-202ENST00000509637 CGNQ9P2M7 1197 aaKnown RBP16.81■□□□□ 0.28
RAB40C-202ENST00000509637 CYP8B1Q9UNU6 501 aa16.81■□□□□ 0.28
RAB40C-202ENST00000509637 SCML2Q9UQR0 700 aa16.81■□□□□ 0.28
RAB40C-202ENST00000509637 NEDD8-MDP1E9PL57 170 aa16.8■□□□□ 0.28
RAB40C-202ENST00000509637 GJB3O75712 270 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms