RNA–Protein interactions for RNA: ENST00000509564.1

SDHA-211, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-211ENST00000509564 LINC00597Q9H2U6 94 aa12.67□□□□□ -0.38
SDHA-211ENST00000509564 FBRSL1Q9HCM7 1045 aaKnown RBP12.67□□□□□ -0.38
SDHA-211ENST00000509564 ARHGEF4Q9NR80 690 aa12.67□□□□□ -0.38
SDHA-211ENST00000509564 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.67□□□□□ -0.38
SDHA-211ENST00000509564 GVINP1Q7Z2Y8 2422 aa12.67□□□□□ -0.38
SDHA-211ENST00000509564 ADAMTS9Q9P2N4 1935 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 CCDC163A0A0D9SF12 145 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 PPP1R3GB7ZBB8 358 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 NEDD8-MDP1E9PL57 170 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 XPO1O14980 1071 aaKnown RBP12.66□□□□□ -0.38
SDHA-211ENST00000509564 MDM4O15151 490 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 P4HA2O15460 535 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 KAT7O95251 611 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 FGFR1OPO95684 399 aaKnown RBP12.66□□□□□ -0.38
SDHA-211ENST00000509564 SETSIPP0DME0 302 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 BMP6P22004 513 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 ID4P47928 161 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 STX17P56962 302 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 ADIGQ0VDE8 80 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 ANO4Q32M45 955 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 PREPLQ4J6C6 727 aaPredicted RBP12.66□□□□□ -0.38
SDHA-211ENST00000509564 LY6G5CQ5SRR4 150 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 RSRC2Q7L4I2 434 aaKnown RBP12.66□□□□□ -0.38
SDHA-211ENST00000509564 PIGZQ86VD9 579 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 TTC30AQ86WT1 665 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 MIB1Q86YT6 1006 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 SIX6OS1Q8N1H7 587 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 CAMKK1Q8N5S9 505 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 TATDN2Q93075 761 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 NMUR1Q9HB89 426 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 SPHK2Q9NRA0 654 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 OSER1Q9NX31 292 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 DNMT3LQ9UJW3 386 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 MMP17Q9ULZ9 603 aa12.66□□□□□ -0.38
SDHA-211ENST00000509564 M0QYV0 167 aa12.65□□□□□ -0.38
SDHA-211ENST00000509564 AXIN1O15169 862 aa12.65□□□□□ -0.38
SDHA-211ENST00000509564 LRP3O75074 770 aa12.65□□□□□ -0.38
SDHA-211ENST00000509564 AFPP02771 609 aaKnown RBP12.65□□□□□ -0.38
SDHA-211ENST00000509564 PXNP49023 591 aaPredicted RBP12.65□□□□□ -0.38
SDHA-211ENST00000509564 PGFP49763 221 aa12.65□□□□□ -0.38
SDHA-211ENST00000509564 MARSP56192 900 aaKnown RBP12.65□□□□□ -0.38
SDHA-211ENST00000509564 CAMK4Q16566 473 aa12.65□□□□□ -0.38
SDHA-211ENST00000509564 HSF5Q4G112 596 aaPredicted RBP12.65□□□□□ -0.38
SDHA-211ENST00000509564 C2orf27AQ580R0 203 aa12.65□□□□□ -0.38
SDHA-211ENST00000509564 TMEM270Q6UE05 265 aa12.65□□□□□ -0.38
SDHA-211ENST00000509564 TRIM59Q8IWR1 403 aa12.65□□□□□ -0.38
SDHA-211ENST00000509564 UBR7Q8N806 425 aa12.65□□□□□ -0.38
SDHA-211ENST00000509564 TERB1Q8NA31 727 aa12.65□□□□□ -0.38
SDHA-211ENST00000509564 ANKRD52Q8NB46 1076 aa12.65□□□□□ -0.38
SDHA-211ENST00000509564 USP33Q8TEY7 942 aa12.65□□□□□ -0.38
SDHA-211ENST00000509564 CNOT6LQ96LI5 555 aaKnown RBP12.65□□□□□ -0.38
SDHA-211ENST00000509564 BBS2Q9BXC9 721 aa12.65□□□□□ -0.38
SDHA-211ENST00000509564 LRRC4Q9HBW1 653 aa12.65□□□□□ -0.38
SDHA-211ENST00000509564 CLIC5Q9NZA1 410 aa12.65□□□□□ -0.38
SDHA-211ENST00000509564 KIAA1468Q9P260 1216 aa12.65□□□□□ -0.38
SDHA-211ENST00000509564 NUDT5Q9UKK9 219 aa12.65□□□□□ -0.38
SDHA-211ENST00000509564 STRIP2Q9ULQ0 834 aa12.65□□□□□ -0.38
SDHA-211ENST00000509564 PCDHB4Q9Y5E5 795 aa12.65□□□□□ -0.38
SDHA-211ENST00000509564 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.65□□□□□ -0.38
SDHA-211ENST00000509564 USP3Q9Y6I4 520 aa12.65□□□□□ -0.38
SDHA-211ENST00000509564 K7EQS6 105 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 O00370 1275 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 PMM2O15305 246 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 CACNG3O60359 315 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 TULP3O75386 442 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 RETP07949 1114 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 PAEPP09466 180 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 VDRP11473 427 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 PLA2G4AP47712 749 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 TKTL1P51854 596 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 YWHAGP61981 247 aaKnown RBP eCLIP12.64□□□□□ -0.39
SDHA-211ENST00000509564 MRPS21P82921 87 aaKnown RBP12.64□□□□□ -0.39
SDHA-211ENST00000509564 PDE4CQ08493 712 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 SPEM2Q0P670 501 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 EFEMP1Q12805 493 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 RAB41Q5JT25 222 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 C10orf76Q5T2E6 689 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 GRAMD4Q6IC98 578 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 ANO7Q6IWH7 933 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 RHBDF2Q6PJF5 856 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 NUDT18Q6ZVK8 323 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 TRMT11Q7Z4G4 463 aaKnown RBP12.64□□□□□ -0.39
SDHA-211ENST00000509564 ETFBKMTQ8IXQ9 262 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 FAM160A2Q8N612 972 aaPredicted RBP12.64□□□□□ -0.39
SDHA-211ENST00000509564 RBBP8NLQ8NC74 664 aaPredicted RBP12.64□□□□□ -0.39
SDHA-211ENST00000509564 IPO9Q96P70 1041 aaKnown RBP12.64□□□□□ -0.39
SDHA-211ENST00000509564 XPO6Q96QU8 1125 aaKnown RBP12.64□□□□□ -0.39
SDHA-211ENST00000509564 KLF16Q9BXK1 252 aaPredicted RBP12.64□□□□□ -0.39
SDHA-211ENST00000509564 ULBP1Q9BZM6 244 aa12.64□□□□□ -0.39
SDHA-211ENST00000509564 OLA1Q9NTK5 396 aaKnown RBP12.64□□□□□ -0.39
SDHA-211ENST00000509564 DNAJC17Q9NVM6 304 aaKnown RBP12.64□□□□□ -0.39
SDHA-211ENST00000509564 CDV3Q9UKY7 258 aaKnown RBP12.64□□□□□ -0.39
SDHA-211ENST00000509564 ZNF292O60281 2723 aa12.63□□□□□ -0.39
SDHA-211ENST00000509564 HRO43593 1189 aa12.63□□□□□ -0.39
SDHA-211ENST00000509564 STC2O76061 302 aa12.63□□□□□ -0.39
SDHA-211ENST00000509564 KLF8O95600 359 aaPredicted RBP12.63□□□□□ -0.39
SDHA-211ENST00000509564 TBX18O95935 607 aa12.63□□□□□ -0.39
SDHA-211ENST00000509564 TYRP14679 529 aa12.63□□□□□ -0.39
SDHA-211ENST00000509564 BRD2P25440 801 aaKnown RBP12.63□□□□□ -0.39
SDHA-211ENST00000509564 CORO1AP31146 461 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms