RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 UBXN6Q9BZV1 441 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 GOLPH3LQ9H4A5 285 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 MMRN2Q9H8L6 949 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 APOBEC3GQ9HC16 384 aaKnown RBP13.33□□□□□ -0.28
KDM3B-206ENST00000509468 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.33□□□□□ -0.28
KDM3B-206ENST00000509468 HMGXB4Q9UGU5 601 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 DNMT3LQ9UJW3 386 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 LSM7Q9UK45 103 aaKnown RBP13.33□□□□□ -0.28
KDM3B-206ENST00000509468 BCLAF3A2AJT9 711 aaKnown RBP13.32□□□□□ -0.28
KDM3B-206ENST00000509468 HHLA1C9JL84 531 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 ZBTB24O43167 697 aaPredicted RBP13.32□□□□□ -0.28
KDM3B-206ENST00000509468 MAP3K13O43283 966 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 TULP3O75386 442 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 TBX18O95935 607 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 IRF1P10914 325 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 RARGP13631 454 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 CD58P19256 250 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 KIR2DL1P43626 348 aaPredicted RBP13.32□□□□□ -0.28
KDM3B-206ENST00000509468 SLC8A3P57103 927 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 CREB5Q02930 508 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 CCDC6Q16204 474 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 ZCWPW2Q504Y3 356 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 PPM1JQ5JR12 505 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 STPG1Q5TH74 334 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 EMC10Q5UCC4 262 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 TMEM92Q6UXU6 159 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 TTC30AQ86WT1 665 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 TMEM25Q86YD3 366 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 FBXL13Q8NEE6 735 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 WHAMMQ8TF30 809 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 GSDMAQ96QA5 445 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 TWNKQ96RR1 684 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 CDK5RAP1Q96SZ6 601 aaKnown RBP13.32□□□□□ -0.28
KDM3B-206ENST00000509468 TSG101Q99816 390 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 RAB20Q9NX57 234 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 HOOK1Q9UJC3 728 aaKnown RBP13.32□□□□□ -0.28
KDM3B-206ENST00000509468 INVSQ9Y283 1065 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 STARD13Q9Y3M8 1113 aa13.32□□□□□ -0.28
KDM3B-206ENST00000509468 NUP205Q92621 2012 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 SGK1O00141 431 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 SMC2O95347 1197 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 ADRB1P08588 477 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 RALAP11233 206 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 PGFP49763 221 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 KIF11P52732 1056 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 COG7P83436 770 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 KDSRQ06136 332 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 BECN1Q14457 450 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 SPDYCQ5MJ68 293 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 ZNF658Q5TYW1 1059 aaPredicted RBP13.31□□□□□ -0.28
KDM3B-206ENST00000509468 SDE2Q6IQ49 451 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 C12orf40Q86WS4 652 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 ETFBKMTQ8IXQ9 262 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 PGBD3Q8N328 593 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 ARHGAP18Q8N392 663 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 PHTF2Q8N3S3 785 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 OLIG1Q8TAK6 271 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 JAKMIP2Q96AA8 810 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 TMEM176AQ96HP8 235 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 SPACA7Q96KW9 195 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 TPSD1Q9BZJ3 242 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.31□□□□□ -0.28
KDM3B-206ENST00000509468 CLIC5Q9NZA1 410 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 BCCIPQ9P287 314 aaKnown RBP eCLIP13.31□□□□□ -0.28
KDM3B-206ENST00000509468 NAGPAQ9UK23 515 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 ZNF510Q9Y2H8 683 aa13.31□□□□□ -0.28
KDM3B-206ENST00000509468 SDK1Q7Z5N4 2213 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 A0A1W2PQH9 124 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 TM4SF5O14894 197 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 KHNYNO15037 678 aaKnown RBP13.3□□□□□ -0.28
KDM3B-206ENST00000509468 CYP26A1O43174 497 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 PRCPP42785 496 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 MXI1P50539 228 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 NUCB2P80303 420 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 FKBP3Q00688 224 aaKnown RBP13.3□□□□□ -0.28
KDM3B-206ENST00000509468 MESP2Q0VG99 397 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 COBLL1Q53SF7 1204 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 C10orf120Q5SQS8 335 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 PPP1R26Q5T8A7 1209 aaPredicted RBP13.3□□□□□ -0.28
KDM3B-206ENST00000509468 PMS2CLQ68D20 193 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 RNF43Q68DV7 783 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 CCDC186Q7Z3E2 898 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 SFTPA1Q8IWL2 248 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 SMYD4Q8IYR2 804 aaPredicted RBP13.3□□□□□ -0.28
KDM3B-206ENST00000509468 FMR1NBQ8N0W7 255 aaPredicted RBP13.3□□□□□ -0.28
KDM3B-206ENST00000509468 ZNF513Q8N8E2 541 aaPredicted RBP13.3□□□□□ -0.28
KDM3B-206ENST00000509468 TERB1Q8NA31 727 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 MDGA1Q8NFP4 955 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 WBP2Q969T9 261 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 BBS2Q9BXC9 721 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 GDPD2Q9HCC8 539 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 CISHQ9NSE2 258 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 OSER1Q9NX31 292 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 GTF3C3Q9Y5Q9 886 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 USP3Q9Y6I4 520 aa13.3□□□□□ -0.28
KDM3B-206ENST00000509468 MYO18AQ92614 2054 aaKnown RBP13.29□□□□□ -0.28
KDM3B-206ENST00000509468 ANTXRLA6NF34 631 aa13.29□□□□□ -0.28
KDM3B-206ENST00000509468 CACNG3O60359 315 aa13.29□□□□□ -0.28
KDM3B-206ENST00000509468 GREM1O60565 184 aa13.29□□□□□ -0.28
KDM3B-206ENST00000509468 ADAM23O75077 832 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms