RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 MTX1Q13505 466 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 NFYCQ13952 458 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 MAPRE2Q15555 327 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 MAPKAPK3Q16644 382 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 KLHL22Q53GT1 634 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 ODF2Q5BJF6 829 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 FBXO48Q5FWF7 155 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 TCTE1Q5JU00 501 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 RNASEH2BQ5TBB1 312 aaKnown RBP4.8□□□□□ -1.64
NIPBL-206ENST00000509429 NDUFAF5Q5TEU4 345 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 HEATR6Q6AI08 1181 aaKnown RBP4.8□□□□□ -1.64
NIPBL-206ENST00000509429 PM20D1Q6GTS8 502 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 FBXO42Q6P3S6 717 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 LRSAM1Q6UWE0 723 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 CRELD2Q6UXH1 353 aaPredicted RBP4.8□□□□□ -1.64
NIPBL-206ENST00000509429 RGS9BPQ6ZS82 235 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 GK5Q6ZS86 529 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 RHOUQ7L0Q8 258 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 EPM2AIP1Q7L775 607 aaPredicted RBP4.8□□□□□ -1.64
NIPBL-206ENST00000509429 ARHGAP22Q7Z5H3 698 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 KIAA1328Q86T90 577 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 KRT73Q86Y46 540 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 ITPRIPQ8IWB1 547 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 REXO1Q8N1G1 1221 aaKnown RBP4.8□□□□□ -1.64
NIPBL-206ENST00000509429 PPM1NQ8N819 430 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 XXYLT1Q8NBI6 393 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 ZBTB44Q8NCP5 570 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 MOSPD2Q8NHP6 518 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 SLC30A5Q8TAD4 765 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 IFI44Q8TCB0 444 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 LPIN2Q92539 896 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 ANKS1AQ92625 1134 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 USP13Q92995 863 aaPredicted RBP4.8□□□□□ -1.64
NIPBL-206ENST00000509429 PPP2R3CQ969Q6 453 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 WDR24Q96S15 920 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 SLF1Q9BQI6 1058 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 WDR12Q9GZL7 423 aaKnown RBP4.8□□□□□ -1.64
NIPBL-206ENST00000509429 BHMT2Q9H2M3 363 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 NELFAQ9H3P2 528 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 PRDM13Q9H4Q3 707 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 SPON1Q9HCB6 807 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 TM9SF3Q9HD45 589 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 UBN1Q9NPG3 1134 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 ANLNQ9NQW6 1124 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 SDHAF3Q9NRP4 125 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 POLKQ9UBT6 870 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 FETUBQ9UGM5 382 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 ZFP69BQ9UJL9 534 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 RCAN3Q9UKA8 241 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 ZBTB21Q9ULJ3 1066 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 EFR3BQ9Y2G0 817 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 PCDHB2Q9Y5E7 798 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 PCDHGB5Q9Y5G0 923 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.8□□□□□ -1.64
NIPBL-206ENST00000509429 NAIPQ13075 1403 aa4.8□□□□□ -1.64
NIPBL-206ENST00000509429 DNMT1P26358 1616 aaKnown RBP4.79□□□□□ -1.64
NIPBL-206ENST00000509429 IQGAP2Q13576 1575 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 TNKSO95271 1327 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 CNTNAP2Q9UHC6 1331 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 WDR62O43379 1518 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 LRRC14BA6NHZ5 514 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 E9PMD0 336 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 HDAC3O15379 428 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 ECDO95905 644 aaPredicted RBP4.79□□□□□ -1.64
NIPBL-206ENST00000509429 S100A9P06702 114 aaKnown RBP4.79□□□□□ -1.64
NIPBL-206ENST00000509429 POLR2MP0CAP2 368 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 CPEP16870 476 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 GAP43P17677 238 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 ANXA13P27216 316 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 SOX9P48436 509 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 HNMTP50135 292 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 ARHGDIBP52566 201 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 DRG2P55039 364 aaKnown RBP4.79□□□□□ -1.64
NIPBL-206ENST00000509429 EIF4A1P60842 406 aaKnown RBP4.79□□□□□ -1.64
NIPBL-206ENST00000509429 HAND2P61296 217 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 BYSLQ13895 437 aaKnown RBP4.79□□□□□ -1.64
NIPBL-206ENST00000509429 IDI1Q13907 227 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 KCNB1Q14721 858 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 NAA25Q14CX7 972 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 PTPAQ15257 358 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 LRRC23Q53EV4 343 aaPredicted RBP4.79□□□□□ -1.64
NIPBL-206ENST00000509429 XKR9Q5GH70 373 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 HECTD2Q5U5R9 776 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 TWF2Q6IBS0 349 aaKnown RBP4.79□□□□□ -1.64
NIPBL-206ENST00000509429 RPUSD3Q6P087 351 aaKnown RBP4.79□□□□□ -1.64
NIPBL-206ENST00000509429 ARHGAP36Q6ZRI8 547 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 MAMDC2Q7Z304 686 aaPredicted RBP4.79□□□□□ -1.64
NIPBL-206ENST00000509429 LUZP1Q86V48 1076 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 P3H2Q8IVL5 708 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 MFN1Q8IWA4 741 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 CD302Q8IX05 232 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 ANKRD35Q8N283 1001 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 STPG3Q8N7X2 389 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 C2orf69Q8N8R5 385 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 AVL9Q8NBF6 648 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 SMC1BQ8NDV3 1235 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 DENND6BQ8NEG7 585 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 OR6P1Q8NGX9 317 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 LILRB4Q8NHJ6 448 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 CEP76Q8TAP6 659 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms