RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 SOAT2O75908 522 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 POU2F2P09086 479 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 RALAP11233 206 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 PCK1P35558 622 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 FLT3P36888 993 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 CDR1P51861 262 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 RNASE9P60153 205 aaKnown RBP10.86□□□□□ -0.67
RFC1-211ENST00000509084 YWHAGP61981 247 aaKnown RBP eCLIP10.86□□□□□ -0.67
RFC1-211ENST00000509084 TUBB2AQ13885 445 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 HADHQ16836 314 aaKnown RBP10.86□□□□□ -0.67
RFC1-211ENST00000509084 PPM1LQ5SGD2 360 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 MEI1Q5TIA1 1274 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 SDHAF4Q5VUM1 108 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 BTBD8Q5XKL5 378 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 TMEM92Q6UXU6 159 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 STRADAQ7RTN6 431 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 BHLHA9Q7RTU4 235 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 TADA2BQ86TJ2 420 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 NT5DC3Q86UY8 548 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 EMC1Q8N766 993 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 UBL4BQ8N7F7 174 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 SCAMP5Q8TAC9 235 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 GIPC2Q8TF65 315 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 PSMG2Q969U7 264 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 WDR24Q96S15 920 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 DDX23Q9BUQ8 820 aaKnown RBP10.86□□□□□ -0.67
RFC1-211ENST00000509084 TUBB2BQ9BVA1 445 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 CERS4Q9HA82 394 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 OLA1Q9NTK5 396 aaKnown RBP10.86□□□□□ -0.67
RFC1-211ENST00000509084 ZDHHC7Q9NXF8 308 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 CLIC5Q9NZA1 410 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 LMCD1Q9NZU5 365 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.86□□□□□ -0.67
RFC1-211ENST00000509084 ALG6Q9Y672 507 aa10.86□□□□□ -0.67
RFC1-211ENST00000509084 PSTPIP1O43586 416 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 GRAP2O75791 330 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 ZMYND10O75800 440 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 CSPG5O95196 566 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 GJB6O95452 261 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 FGF19O95750 216 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 FTCDO95954 541 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 HNRNPA1P09651 372 aaKnown RBP eCLIP10.85□□□□□ -0.67
RFC1-211ENST00000509084 SRGAP2BP0DMP2 458 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 NCAM1P13591 858 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 TCP1P17987 556 aaKnown RBP10.85□□□□□ -0.67
RFC1-211ENST00000509084 COMTP21964 271 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 CTNNA2P26232 953 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 OGDHQ02218 1023 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 ZNF252P-AS1Q0IIN9 211 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 TAF10Q12962 218 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 RPS6KA1Q15418 735 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 DUSP6Q16828 381 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 SLC25A52Q3SY17 297 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 PABPC1LQ4VXU2 614 aaKnown RBP10.85□□□□□ -0.67
RFC1-211ENST00000509084 DCAF6Q58WW2 860 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 LRRC38Q5VT99 294 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 BSPRYQ5W0U4 402 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 RHOT1Q8IXI2 618 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 DEFB106AQ8N104 65 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 ZNF276Q8N554 614 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 LEMD2Q8NC56 503 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 STKLD1Q8NE28 680 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 RNF139Q8WU17 664 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 SLC22A17Q8WUG5 538 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 KHSRPQ92945 711 aaKnown RBP eCLIP10.85□□□□□ -0.67
RFC1-211ENST00000509084 PGAP3Q96FM1 320 aaPredicted RBP10.85□□□□□ -0.67
RFC1-211ENST00000509084 BTBD6Q96KE9 485 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 ZNF512Q96ME7 567 aaPredicted RBP10.85□□□□□ -0.67
RFC1-211ENST00000509084 GCNAQ96QF7 691 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 NPY6RQ99463 290 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 TRIM7Q9C029 511 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 ZNF576Q9H609 170 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 TLE6Q9H808 572 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 MAN1C1Q9NR34 630 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 MAGED2Q9UNF1 606 aaPredicted RBP10.85□□□□□ -0.67
RFC1-211ENST00000509084 HYOU1Q9Y4L1 999 aa10.85□□□□□ -0.67
RFC1-211ENST00000509084 GREB1Q4ZG55 1949 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 A0A1W2PQH9 124 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 CES2O00748 559 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 XYLBO75191 536 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 F9P00740 461 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 KRT7P08729 469 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 ZDHHC11BP0C7U3 371 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 PRLRP16471 622 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 GBP1P32455 592 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 CTNNA1P35221 906 aaKnown RBP10.84□□□□□ -0.67
RFC1-211ENST00000509084 RDXP35241 583 aaKnown RBP10.84□□□□□ -0.67
RFC1-211ENST00000509084 SULT1E1P49888 294 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 TUBP50607 506 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 AIF1P55008 147 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 USP46P62068 366 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 NNTQ13423 1086 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 TAF5Q15542 800 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 SNX30Q5VWJ9 437 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 PAPD7Q5XG87 772 aaKnown RBP10.84□□□□□ -0.67
RFC1-211ENST00000509084 CC2D1AQ6P1N0 951 aaPredicted RBP10.84□□□□□ -0.67
RFC1-211ENST00000509084 MSANTD2Q6P1R3 559 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 SND1Q7KZF4 910 aaKnown RBP eCLIP10.84□□□□□ -0.67
RFC1-211ENST00000509084 POLNQ7Z5Q5 900 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 DNAJB7Q7Z6W7 309 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms