RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 TTC14Q96N46 770 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 C7orf25Q9BPX7 421 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 TMEM47Q9BQJ4 181 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 PDCD2LQ9BRP1 358 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 C1QTNF3Q9BXJ4 246 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 GPR87Q9BY21 358 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 CPEB1Q9BZB8 566 aaKnown RBP4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 RANBP17Q9H2T7 1088 aaKnown RBP4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 RNF41Q9H4P4 317 aaPredicted RBP4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 ACAD9Q9H845 621 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 BCO1Q9HAY6 547 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 A1CFQ9NQ94 594 aaKnown RBP4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 XPNPEP3Q9NQH7 507 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 DIAPH3Q9NSV4 1193 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 RNF146Q9NTX7 359 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 LIMCH1Q9UPQ0 1083 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 SIK3Q9Y2K2 1263 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 LUC7L2Q9Y383 392 aaKnown RBP4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 TSC22D4Q9Y3Q8 395 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 PCDHA13Q9Y5I0 950 aa4.04□□□□□ -1.76
UBE2D3-226ENST00000508635 DNAH12Q6ZR08 3092 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 ALPK3Q96L96 1907 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 NEDD4P46934 1319 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 FRMPD2Q68DX3 1309 aaPredicted RBP4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 SYNRGQ9UMZ2 1314 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 COL11A1P12107 1806 aaPredicted RBP4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 PDE4DIPQ5VU43 2346 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 CCDC154A6NI56 674 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 FAM171A2A8MVW0 826 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 KBTBD13C9JR72 458 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 DUSP11O75319 330 aaKnown RBP4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 ICAM1P05362 532 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 SNHG28P0DPA3 235 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 RAP2AP10114 183 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 PDHBP11177 359 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 ALAS1P13196 640 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 FPR1P21462 350 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 SLC16A2P36021 539 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 SLC6A9P48067 706 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 NT5C2P49902 561 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 PTTG1IPP53801 180 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 SLC16A1P53985 500 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 CNTN2Q02246 1040 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 ZNF543Q08ER8 600 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 IKQ13123 557 aaPredicted RBP4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 IL10RAQ13651 578 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 ACVR2BQ13705 512 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 CCDC96Q2M329 555 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 C3orf36Q3SXR2 165 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 LRIT3Q3SXY7 679 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 TRIM60Q495X7 471 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 BMP2KLQ5H9B9 411 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 CCSAPQ6IQ19 270 aaPredicted RBP4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 ARMCX2Q7L311 632 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 APBB1IPQ7Z5R6 666 aaPredicted RBP4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 C1orf210Q8IVY1 113 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 TDHQ8IZJ6 230 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 RNF169Q8NCN4 708 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 KLHDC9Q8NEP7 349 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 MDGA1Q8NFP4 955 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 ANKS1AQ92625 1134 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 ESR2Q92731 530 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 MNTQ99583 582 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 SLC13A1Q9BZW2 595 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 IL25Q9H293 177 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 ABHD16BQ9H3Z7 469 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 LANCL2Q9NS86 450 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 CYP39A1Q9NYL5 469 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 IP6K2Q9UHH9 426 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 CTNNA3Q9UI47 895 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 AJAP1Q9UKB5 411 aaPredicted RBP4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 ZHX1Q9UKY1 873 aaPredicted RBP4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 CCPG1Q9ULG6 757 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 ISY1Q9ULR0 285 aaKnown RBP4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 RUVBL1Q9Y265 456 aaKnown RBP4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 ATP11BQ9Y2G3 1177 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 TESMINQ9Y4I5 508 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 SPEF1Q9Y4P9 236 aa4.03□□□□□ -1.76
UBE2D3-226ENST00000508635 FRMPD3Q5JV73 1810 aa4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 ASTN1O14525 1302 aa4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 RAD50Q92878 1312 aa4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 ZNFX1Q9P2E3 1918 aaKnown RBP4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 MYH4Q9Y623 1939 aa4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 TRIM43BA6NCK2 446 aa4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 MYADML2A6NDP7 307 aa4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 ASB14A6NK59 587 aa4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 CXorf49A8MYA2 514 aaPredicted RBP4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 PRR5-ARHGAP8B1AHC4 643 aa4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 C1QTNF3-AMACRE9PGA6 284 aa4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 CTAGE5O15320 804 aa4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 HTRA2O43464 458 aaPredicted RBP4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 ENDOD1O94919 500 aa4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 ZRANB2O95218 330 aaKnown RBP eCLIP4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 IL33O95760 270 aa4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 GOLGA8HP0CJ92 632 aa4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 EDNRBP24530 442 aa4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 ACRV1P26436 265 aa4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 CST5P28325 142 aaPredicted RBP4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 RECQLP46063 649 aaPredicted RBP4.02□□□□□ -1.77
UBE2D3-226ENST00000508635 MAN2A2P49641 1150 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms