RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 IL21Q9HBE4 155 aa9.06□□□□□ -0.96
USP46-207ENST00000508499 POPDC2Q9HBU9 364 aa9.06□□□□□ -0.96
USP46-207ENST00000508499 ST7Q9NRC1 585 aa9.06□□□□□ -0.96
USP46-207ENST00000508499 SPTLC3Q9NUV7 552 aa9.06□□□□□ -0.96
USP46-207ENST00000508499 SEPT11Q9NVA2 429 aaKnown RBP9.06□□□□□ -0.96
USP46-207ENST00000508499 CLEC1BQ9P126 229 aa9.06□□□□□ -0.96
USP46-207ENST00000508499 PCDHA13Q9Y5I0 950 aa9.06□□□□□ -0.96
USP46-207ENST00000508499 ZNF840PA6NDX5 716 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 ZNF197O14709 1029 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 TBX10O75333 385 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 TADA3O75528 432 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 RFPL2O75678 378 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 SOAT2O75908 522 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 ENDOD1O94919 500 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 LTFP02788 710 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 SPATA31D3P0C874 917 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 RRM1P23921 792 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 NOS2P35228 1153 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 GTF2F1P35269 517 aaKnown RBP eCLIP9.05□□□□□ -0.96
USP46-207ENST00000508499 ARHGAP25P42331 645 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 PTPN9P43378 593 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 GPR15P49685 360 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 RGS7P49802 495 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 TAF10Q12962 218 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 PRSS36Q5K4E3 855 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 SPATA31D4Q6ZUB0 917 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 FAM183BPQ6ZVS7 135 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 RNF10Q8N5U6 811 aaKnown RBP9.05□□□□□ -0.96
USP46-207ENST00000508499 NIPA2Q8N8Q9 360 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 SMRP1Q8NCR6 262 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 NECTIN4Q96NY8 510 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 NCAPGQ9BPX3 1015 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 C11orf70Q9BRQ4 267 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 ULBP1Q9BZM6 244 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 TSGA10Q9BZW7 698 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 THAP2Q9H0W7 228 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 SYNCQ9H7C4 482 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 ASAH2Q9NR71 780 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 OLA1Q9NTK5 396 aaKnown RBP9.05□□□□□ -0.96
USP46-207ENST00000508499 DNMT3BQ9UBC3 853 aaKnown RBP9.05□□□□□ -0.96
USP46-207ENST00000508499 CNOT8Q9UFF9 292 aaKnown RBP9.05□□□□□ -0.96
USP46-207ENST00000508499 GOLGA6L9A6NEM1 432 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 TMEM191CA6NGB0 347 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 C2CD4BA6NLJ0 364 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 YJEFN3A6XGL0 299 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 E7ENQ6 273 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 CCP110O43303 1012 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 KRT86O43790 486 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 DAB1O75553 588 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 OAS1P00973 400 aaKnown RBP9.05□□□□□ -0.96
USP46-207ENST00000508499 IGLV3-25P01717 112 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 FYNP06241 537 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 USP17L7P0C7H9 530 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 KRT3P12035 628 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 LCP1P13796 627 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 TCF3P15923 654 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 SSTR3P32745 418 aaPredicted RBP9.05□□□□□ -0.96
USP46-207ENST00000508499 MAN1A1P33908 653 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 MATKP42679 507 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 MTA1Q13330 715 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 CYP4A22Q5TCH4 519 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 BSPRYQ5W0U4 402 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 GAREM2Q75VX8 874 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 SCD5Q86SK9 330 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 TADA2BQ86TJ2 420 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 STKLD1Q8NE28 680 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 SUSD6Q92537 303 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 CENPIQ92674 756 aaPredicted RBP9.05□□□□□ -0.96
USP46-207ENST00000508499 GOLGA1Q92805 767 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 FBXO32Q969P5 355 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 ZNF653Q96CK0 615 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 WDR6Q9NNW5 1121 aaKnown RBP9.05□□□□□ -0.96
USP46-207ENST00000508499 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.05□□□□□ -0.96
USP46-207ENST00000508499 TRPM5Q9NZQ8 1165 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 TJP2Q9UDY2 1190 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 COG5Q9UP83 839 aa9.05□□□□□ -0.96
USP46-207ENST00000508499 ZFP37Q9Y6Q3 630 aaPredicted RBP9.05□□□□□ -0.96
USP46-207ENST00000508499 TMCO5BA8MYB1 307 aa9.04□□□□□ -0.96
USP46-207ENST00000508499 CCL16O15467 120 aa9.04□□□□□ -0.96
USP46-207ENST00000508499 LINC01565O15544 149 aa9.04□□□□□ -0.96
USP46-207ENST00000508499 ZSCAN12O43309 604 aa9.04□□□□□ -0.96
USP46-207ENST00000508499 MOSPD3O75425 235 aa9.04□□□□□ -0.96
USP46-207ENST00000508499 RHOP08100 348 aa9.04□□□□□ -0.96
USP46-207ENST00000508499 FOSL2P15408 326 aa9.04□□□□□ -0.96
USP46-207ENST00000508499 MTHFRP42898 656 aa9.04□□□□□ -0.96
USP46-207ENST00000508499 KPNA1P52294 538 aaPredicted RBP9.04□□□□□ -0.96
USP46-207ENST00000508499 ZNF143P52747 638 aaPredicted RBP9.04□□□□□ -0.96
USP46-207ENST00000508499 YWHAGP61981 247 aaKnown RBP eCLIP9.04□□□□□ -0.96
USP46-207ENST00000508499 KIF5AQ12840 1032 aa9.04□□□□□ -0.96
USP46-207ENST00000508499 MTMR3Q13615 1198 aa9.04□□□□□ -0.96
USP46-207ENST00000508499 TAF12Q16514 161 aa9.04□□□□□ -0.96
USP46-207ENST00000508499 SLC25A52Q3SY17 297 aa9.04□□□□□ -0.96
USP46-207ENST00000508499 ACBD5Q5T8D3 534 aaPredicted RBP9.04□□□□□ -0.96
USP46-207ENST00000508499 FAM102AQ5T9C2 384 aaPredicted RBP9.04□□□□□ -0.96
USP46-207ENST00000508499 SDHAF4Q5VUM1 108 aa9.04□□□□□ -0.96
USP46-207ENST00000508499 OR6B2Q6IFH4 312 aa9.04□□□□□ -0.96
USP46-207ENST00000508499 CES5AQ6NT32 575 aa9.04□□□□□ -0.96
USP46-207ENST00000508499 LLGL2Q6P1M3 1020 aa9.04□□□□□ -0.96
USP46-207ENST00000508499 DNAJC24Q6P3W2 148 aa9.04□□□□□ -0.96
USP46-207ENST00000508499 STRADAQ7RTN6 431 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms