RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 FAM83DQ9H4H8 585 aa5.54□□□□□ -1.52
UBE2D3-225ENST00000508476 TRIM36Q9NQ86 728 aa5.54□□□□□ -1.52
UBE2D3-225ENST00000508476 DNAJB11Q9UBS4 358 aa5.54□□□□□ -1.52
UBE2D3-225ENST00000508476 RGS17Q9UGC6 210 aaPredicted RBP5.54□□□□□ -1.52
UBE2D3-225ENST00000508476 CAPN11Q9UMQ6 739 aa5.54□□□□□ -1.52
UBE2D3-225ENST00000508476 SNX13Q9Y5W8 968 aa5.54□□□□□ -1.52
UBE2D3-225ENST00000508476 A0A087WZ62 844 aa5.53□□□□□ -1.52
UBE2D3-225ENST00000508476 PPEF2O14830 753 aa5.53□□□□□ -1.52
UBE2D3-225ENST00000508476 HOXD9P28356 352 aaPredicted RBP5.53□□□□□ -1.52
UBE2D3-225ENST00000508476 COPAP53621 1224 aa5.53□□□□□ -1.52
UBE2D3-225ENST00000508476 KCNB1Q14721 858 aa5.53□□□□□ -1.52
UBE2D3-225ENST00000508476 KLHDC7AQ5VTJ3 777 aa5.53□□□□□ -1.52
UBE2D3-225ENST00000508476 OSR1Q8TAX0 266 aaPredicted RBP5.53□□□□□ -1.52
UBE2D3-225ENST00000508476 MAP4K1Q92918 833 aa5.53□□□□□ -1.52
UBE2D3-225ENST00000508476 PHKBQ93100 1093 aa5.53□□□□□ -1.52
UBE2D3-225ENST00000508476 PRR11Q96HE9 360 aaPredicted RBP5.53□□□□□ -1.52
UBE2D3-225ENST00000508476 HS6ST2Q96MM7 605 aa5.53□□□□□ -1.52
UBE2D3-225ENST00000508476 FCRL4Q96PJ5 515 aa5.53□□□□□ -1.52
UBE2D3-225ENST00000508476 FAM118BQ9BPY3 351 aa5.53□□□□□ -1.52
UBE2D3-225ENST00000508476 SELENOOQ9BVL4 669 aa5.53□□□□□ -1.52
UBE2D3-225ENST00000508476 BRIP1Q9BX63 1249 aa5.53□□□□□ -1.52
UBE2D3-225ENST00000508476 BTBD1Q9H0C5 482 aa5.53□□□□□ -1.52
UBE2D3-225ENST00000508476 TRNAU1APQ9NX07 287 aaKnown RBP5.53□□□□□ -1.52
UBE2D3-225ENST00000508476 TUBA8Q9NY65 449 aaPredicted RBP5.53□□□□□ -1.52
UBE2D3-225ENST00000508476 NKX1-2Q9UD57 310 aaPredicted RBP5.53□□□□□ -1.52
UBE2D3-225ENST00000508476 A8MVJ9 347 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 H3BNC9 293 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 CLIC1O00299 241 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 DSCR3O14972 297 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 PRAMEF2O60811 474 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 INMTO95050 263 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 ANXA2P07355 339 aaKnown RBP5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 PHKG2P15735 406 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 RBL1P28749 1068 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 PTGER1P34995 402 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 PIK3CBP42338 1070 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 EIF4A1P60842 406 aaKnown RBP5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 GPC5P78333 572 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 CFHR3Q02985 330 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 SLC14A1Q13336 389 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 MFSD13AQ14CX5 517 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 DENND2CQ68D51 928 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 GRHL2Q6ISB3 625 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 RANBP10Q6VN20 620 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 RNF44Q7L0R7 432 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 C12orf76Q8N812 135 aaPredicted RBP5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 PRSS3P2Q8NHM4 247 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 ZBTB9Q96C00 473 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 ZNF668Q96K58 619 aaPredicted RBP5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 STRBPQ96SI9 672 aaKnown RBP5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 NUP62CLQ9H1M0 184 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 USP29Q9HBJ7 922 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 STEAP1Q9UHE8 339 aa5.52□□□□□ -1.53
UBE2D3-225ENST00000508476 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.51□□□□□ -1.53
UBE2D3-225ENST00000508476 RHPN2P1A8MT19 583 aa5.51□□□□□ -1.53
UBE2D3-225ENST00000508476 FYB1O15117 783 aa5.51□□□□□ -1.53
UBE2D3-225ENST00000508476 SNX2O60749 519 aa5.51□□□□□ -1.53
UBE2D3-225ENST00000508476 PQBP1O60828 265 aaKnown RBP5.51□□□□□ -1.53
UBE2D3-225ENST00000508476 IGKV2-30P06310 120 aa5.51□□□□□ -1.53
UBE2D3-225ENST00000508476 CD19P15391 556 aa5.51□□□□□ -1.53
UBE2D3-225ENST00000508476 ADRA1DP25100 572 aa5.51□□□□□ -1.53
UBE2D3-225ENST00000508476 TRIP6Q15654 476 aaKnown RBP5.51□□□□□ -1.53
UBE2D3-225ENST00000508476 TMTC4Q5T4D3 741 aa5.51□□□□□ -1.53
UBE2D3-225ENST00000508476 DGKHQ86XP1 1220 aa5.51□□□□□ -1.53
UBE2D3-225ENST00000508476 LIX1LQ8IVB5 337 aa5.51□□□□□ -1.53
UBE2D3-225ENST00000508476 KRT78Q8N1N4 520 aa5.51□□□□□ -1.53
UBE2D3-225ENST00000508476 PNPLA1Q8N8W4 532 aa5.51□□□□□ -1.53
UBE2D3-225ENST00000508476 IPCEF1Q8WWN9 437 aaPredicted RBP5.51□□□□□ -1.53
UBE2D3-225ENST00000508476 UNKQ9C0B0 810 aaKnown RBP5.51□□□□□ -1.53
UBE2D3-225ENST00000508476 DDX21Q9NR30 783 aaKnown RBP eCLIP5.51□□□□□ -1.53
UBE2D3-225ENST00000508476 GJB4Q9NTQ9 266 aa5.51□□□□□ -1.53
UBE2D3-225ENST00000508476 GAR1Q9NY12 217 aaKnown RBP5.51□□□□□ -1.53
UBE2D3-225ENST00000508476 KPNA5O15131 536 aa5.5□□□□□ -1.53
UBE2D3-225ENST00000508476 YPEL5P62699 121 aa5.5□□□□□ -1.53
UBE2D3-225ENST00000508476 ZNF543Q08ER8 600 aa5.5□□□□□ -1.53
UBE2D3-225ENST00000508476 MTAPQ13126 283 aa5.5□□□□□ -1.53
UBE2D3-225ENST00000508476 DAG1Q14118 895 aa5.5□□□□□ -1.53
UBE2D3-225ENST00000508476 SHC4Q6S5L8 630 aa5.5□□□□□ -1.53
UBE2D3-225ENST00000508476 FSTL5Q8N475 847 aaPredicted RBP5.5□□□□□ -1.53
UBE2D3-225ENST00000508476 NANOGP1Q8N7R0 232 aa5.5□□□□□ -1.53
UBE2D3-225ENST00000508476 IGFBPL1Q8WX77 278 aa5.5□□□□□ -1.53
UBE2D3-225ENST00000508476 ZDHHC12Q96GR4 267 aa5.5□□□□□ -1.53
UBE2D3-225ENST00000508476 SLC25A32Q9H2D1 315 aa5.5□□□□□ -1.53
UBE2D3-225ENST00000508476 PNPLA8Q9NP80 782 aa5.5□□□□□ -1.53
UBE2D3-225ENST00000508476 VPS45Q9NRW7 570 aa5.5□□□□□ -1.53
UBE2D3-225ENST00000508476 MTMR4Q9NYA4 1195 aa5.5□□□□□ -1.53
UBE2D3-225ENST00000508476 FAM50BQ9Y247 325 aa5.5□□□□□ -1.53
UBE2D3-225ENST00000508476 AFG3L2Q9Y4W6 797 aa5.5□□□□□ -1.53
UBE2D3-225ENST00000508476 RNF8O76064 485 aa5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 IL18RAPO95256 599 aa5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 MBPP02686 304 aaPredicted RBP5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 TMEM225BP0DP42 221 aa5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 CYP19A1P11511 503 aaPredicted RBP5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 RPL17P18621 184 aaKnown RBP5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 ATICP31939 592 aa5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 NR4A2P43354 598 aa5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 GHRHRQ02643 423 aa5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 ST3GAL2Q16842 350 aa5.49□□□□□ -1.53
UBE2D3-225ENST00000508476 C4orf46Q504U0 113 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms