RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 MON1AQ86VX9 555 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 MARCH9Q86YJ5 346 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 SLC41A1Q8IVJ1 513 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 ADGRF2Q8IZF7 708 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 CPA6Q8N4T0 437 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 IL17RCQ8NAC3 791 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 CCDC150Q8NCX0 1101 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 BAHD1Q8TBE0 780 aaPredicted RBP9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 CEP295NLQ96MC4 621 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 CD248Q9HCU0 757 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 ABCB6Q9NP58 842 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 ZDHHC4Q9NPG8 344 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 TMLHEQ9NVH6 421 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 GCNT4Q9P109 453 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 KIAA1468Q9P260 1216 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 ZMYM5Q9UJ78 669 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 MAN1B1Q9UKM7 699 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 MAPK8IP1Q9UQF2 711 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 SNX9Q9Y5X1 595 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 TULP1O00294 542 aaPredicted RBP9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 GABRDO14764 452 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 OPHN1O60890 802 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 MBD3O95983 291 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 C4BPAP04003 597 aaKnown RBP9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 CFIP05156 583 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 TCF3P15923 654 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 WARSP23381 471 aaKnown RBP9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 DDX6P26196 483 aaKnown RBP eCLIP9.78□□□□□ -0.843e-8■□□□□ 10.6
UBE2D3-223ENST00000508249 KIR2DL1P43626 348 aaPredicted RBP9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 NCOA4Q13772 614 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 TRIP6Q15654 476 aaKnown RBP9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 CCDC142Q17RM4 750 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 SGSM1Q2NKQ1 1148 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 ZNF699Q32M78 642 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 ZNF667Q5HYK9 610 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 CT47A1Q5JQC4 288 aaPredicted RBP9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 SPDYCQ5MJ68 293 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 WSCD1Q658N2 575 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 LMBRD2Q68DH5 695 aaPredicted RBP9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 KRT39Q6A163 491 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 PCSK4Q6UW60 755 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 C4orf50Q6ZRC1 276 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 GLRX5Q86SX6 157 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 C12orf40Q86WS4 652 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 NAXDQ8IW45 347 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 PHTF2Q8N3S3 785 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 PDCL2Q8N4E4 241 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 TTC39CQ8N584 583 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 ALLCQ8N6M5 410 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 ATP2A3Q93084 1043 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 FUBP3Q96I24 572 aaKnown RBP eCLIP9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 CYP2S1Q96SQ9 504 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 GTPBP2Q9BX10 602 aaKnown RBP9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 NUP62CLQ9H1M0 184 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 LINC00597Q9H2U6 94 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 CLSTN2Q9H4D0 955 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 TMEM8AQ9HCN3 771 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 DUS2Q9NX74 493 aaKnown RBP9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 DACH1Q9UI36 760 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 HCN2Q9UL51 889 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 CDH9Q9ULB4 789 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 SLC6A14Q9UN76 642 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 L1RE1Q9UN81 338 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 PTPRJQ12913 1337 aa9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 GOLGA4Q13439 2230 aaKnown RBP9.78□□□□□ -0.84
UBE2D3-223ENST00000508249 PTPN13Q12923 2485 aa9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 ARHGAP33O14559 1287 aa9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 NOL4O94818 638 aa9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 CYP17A1P05093 508 aa9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 CASP4P49662 377 aa9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 AMPD2Q01433 879 aa9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 PAK1Q13153 545 aa9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 VEPH1Q14D04 833 aa9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 DUOXA1Q1HG43 343 aa9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 INTS6LQ5JSJ4 861 aaKnown RBP9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 EMC10Q5UCC4 262 aa9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 SDHAF4Q5VUM1 108 aa9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 TDRD10Q5VZ19 366 aaKnown RBP9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 TOGARAM2Q6ZUX3 1019 aa9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 FILIP1Q7Z7B0 1213 aa9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 SMYD4Q8IYR2 804 aaPredicted RBP9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 HDDC3Q8N4P3 179 aa9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 MLKLQ8NB16 471 aa9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 TXNDC5Q8NBS9 432 aaKnown RBP9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 WHAMMQ8TF30 809 aa9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 GCNAQ96QF7 691 aa9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 UBL7Q96S82 380 aaPredicted RBP9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 PKMYT1Q99640 499 aa9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 GZF1Q9H116 711 aaPredicted RBP9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 CD93Q9NPY3 652 aa9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 DDX43Q9NXZ2 648 aaKnown RBP9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 ARMCX3Q9UH62 379 aaPredicted RBP9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 PCDHB5Q9Y5E4 795 aa9.77□□□□□ -0.85
UBE2D3-223ENST00000508249 BOD1L1Q8NFC6 3051 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 C2orf78A6NCI8 922 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 ATXN7O15265 892 aaPredicted RBP9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 PMM2O15305 246 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 P4HA2O15460 535 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 ASS1P00966 412 aaKnown RBP9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 PTMSP20962 102 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms