RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 MIS12Q9H081 205 aa19.07■□□□□ 0.64
NPHP4-210ENST00000506941 GKN1Q9NS71 199 aa19.07■□□□□ 0.64
NPHP4-210ENST00000506941 CFAP97Q9P2B7 532 aa19.07■□□□□ 0.64
NPHP4-210ENST00000506941 FAM170AA1A519 330 aa19.06■□□□□ 0.64
NPHP4-210ENST00000506941 SCAMP3O14828 347 aaKnown RBP19.06■□□□□ 0.64
NPHP4-210ENST00000506941 GPR37L1O60883 481 aa19.06■□□□□ 0.64
NPHP4-210ENST00000506941 FBXO21O94952 628 aa19.06■□□□□ 0.64
NPHP4-210ENST00000506941 RALAP11233 206 aa19.06■□□□□ 0.64
NPHP4-210ENST00000506941 CDH5P33151 784 aaPredicted RBP19.06■□□□□ 0.64
NPHP4-210ENST00000506941 ATP5C1P36542 298 aaKnown RBP19.06■□□□□ 0.64
NPHP4-210ENST00000506941 ACADSBP45954 432 aa19.06■□□□□ 0.64
NPHP4-210ENST00000506941 FMO1Q01740 532 aa19.06■□□□□ 0.64
NPHP4-210ENST00000506941 PFKPQ01813 784 aa19.06■□□□□ 0.64
NPHP4-210ENST00000506941 ARID5AQ03989 594 aa19.06■□□□□ 0.64
NPHP4-210ENST00000506941 PTPN20Q4JDL3 420 aa19.06■□□□□ 0.64
NPHP4-210ENST00000506941 BSPRYQ5W0U4 402 aa19.06■□□□□ 0.64
NPHP4-210ENST00000506941 TRIM68Q6AZZ1 485 aa19.06■□□□□ 0.64
NPHP4-210ENST00000506941 KLHDC10Q6PID8 442 aa19.06■□□□□ 0.64
NPHP4-210ENST00000506941 IRGQQ8WZA9 623 aa19.06■□□□□ 0.64
NPHP4-210ENST00000506941 PIWIL1Q96J94 861 aaKnown RBP19.06■□□□□ 0.64
NPHP4-210ENST00000506941 KLF16Q9BXK1 252 aaPredicted RBP19.06■□□□□ 0.64
NPHP4-210ENST00000506941 NACA2Q9H009 215 aa19.06■□□□□ 0.64
NPHP4-210ENST00000506941 TRPV5Q9NQA5 729 aa19.06■□□□□ 0.64
NPHP4-210ENST00000506941 HPS4Q9NQG7 708 aa19.06■□□□□ 0.64
NPHP4-210ENST00000506941 ARHGEF3Q9NR81 526 aa19.06■□□□□ 0.64
NPHP4-210ENST00000506941 HEBP1Q9NRV9 189 aa19.06■□□□□ 0.64
NPHP4-210ENST00000506941 THG1LQ9NWX6 298 aaKnown RBP19.06■□□□□ 0.64
NPHP4-210ENST00000506941 WNT6Q9Y6F9 365 aa19.06■□□□□ 0.64
NPHP4-210ENST00000506941 SHISA7A6NL88 538 aa19.05■□□□□ 0.64
NPHP4-210ENST00000506941 LRRC53A6NM62 1247 aa19.05■□□□□ 0.64
NPHP4-210ENST00000506941 LTFP02788 710 aa19.05■□□□□ 0.64
NPHP4-210ENST00000506941 ERBB2P04626 1255 aa19.05■□□□□ 0.64
NPHP4-210ENST00000506941 ARSAP15289 507 aa19.05■□□□□ 0.64
NPHP4-210ENST00000506941 PLCB2Q00722 1185 aa19.05■□□□□ 0.64
NPHP4-210ENST00000506941 CDR2Q01850 454 aa19.05■□□□□ 0.64
NPHP4-210ENST00000506941 MLF2Q15773 248 aaPredicted RBP19.05■□□□□ 0.64
NPHP4-210ENST00000506941 SLC44A4Q53GD3 710 aa19.05■□□□□ 0.64
NPHP4-210ENST00000506941 E4F1Q66K89 784 aaPredicted RBP19.05■□□□□ 0.64
NPHP4-210ENST00000506941 GAS2L3Q86XJ1 694 aa19.05■□□□□ 0.64
NPHP4-210ENST00000506941 ZNF677Q86XU0 584 aa19.05■□□□□ 0.64
NPHP4-210ENST00000506941 OSCP1Q8WVF1 389 aa19.05■□□□□ 0.64
NPHP4-210ENST00000506941 EDEM1Q92611 657 aa19.05■□□□□ 0.64
NPHP4-210ENST00000506941 PPP1R13BQ96KQ4 1090 aa19.05■□□□□ 0.64
NPHP4-210ENST00000506941 C1QTNF1Q9BXJ1 281 aa19.05■□□□□ 0.64
NPHP4-210ENST00000506941 GTSE1Q9NYZ3 720 aa19.05■□□□□ 0.64
NPHP4-210ENST00000506941 DNMT3LQ9UJW3 386 aa19.05■□□□□ 0.64
NPHP4-210ENST00000506941 MYO6Q9UM54 1294 aa19.05■□□□□ 0.64
NPHP4-210ENST00000506941 OTOL1A6NHN0 477 aaPredicted RBP19.04■□□□□ 0.64
NPHP4-210ENST00000506941 GREM1O60565 184 aa19.04■□□□□ 0.64
NPHP4-210ENST00000506941 FYNP06241 537 aa19.04■□□□□ 0.64
NPHP4-210ENST00000506941 IRF1P10914 325 aa19.04■□□□□ 0.64
NPHP4-210ENST00000506941 NOMO3P69849 1222 aa19.04■□□□□ 0.64
NPHP4-210ENST00000506941 EFEMP1Q12805 493 aa19.04■□□□□ 0.64
NPHP4-210ENST00000506941 EML3Q32P44 896 aa19.04■□□□□ 0.64
NPHP4-210ENST00000506941 FIGNQ5HY92 759 aa19.04■□□□□ 0.64
NPHP4-210ENST00000506941 BTBD8Q5XKL5 378 aa19.04■□□□□ 0.64
NPHP4-210ENST00000506941 CC2D1AQ6P1N0 951 aaPredicted RBP19.04■□□□□ 0.64
NPHP4-210ENST00000506941 IRF2BP2Q7Z5L9 587 aa19.04■□□□□ 0.64
NPHP4-210ENST00000506941 DDX42Q86XP3 938 aaKnown RBP eCLIP19.04■□□□□ 0.64
NPHP4-210ENST00000506941 MIB1Q86YT6 1006 aa19.04■□□□□ 0.64
NPHP4-210ENST00000506941 TMEM35BQ8NCS4 154 aa19.04■□□□□ 0.64
NPHP4-210ENST00000506941 OLIG1Q8TAK6 271 aa19.04■□□□□ 0.64
NPHP4-210ENST00000506941 TTC8Q8TAM2 541 aa19.04■□□□□ 0.64
NPHP4-210ENST00000506941 CDK5RAP1Q96SZ6 601 aaKnown RBP19.04■□□□□ 0.64
NPHP4-210ENST00000506941 RBSNQ9H1K0 784 aa19.04■□□□□ 0.64
NPHP4-210ENST00000506941 PDCL3Q9H2J4 239 aa19.04■□□□□ 0.64
NPHP4-210ENST00000506941 LINC00597Q9H2U6 94 aa19.04■□□□□ 0.64
NPHP4-210ENST00000506941 EBF3Q9H4W6 596 aa19.04■□□□□ 0.64
NPHP4-210ENST00000506941 DUS2Q9NX74 493 aaKnown RBP19.04■□□□□ 0.64
NPHP4-210ENST00000506941 RASAL2Q9UJF2 1139 aa19.04■□□□□ 0.64
NPHP4-210ENST00000506941 CEP83Q9Y592 693 aa19.04■□□□□ 0.64
NPHP4-210ENST00000506941 ATG2BQ96BY7 2078 aa19.04■□□□□ 0.64
NPHP4-210ENST00000506941 AP5Z1O43299 807 aa19.03■□□□□ 0.64
NPHP4-210ENST00000506941 LSM8O95777 96 aaKnown RBP19.03■□□□□ 0.64
NPHP4-210ENST00000506941 FERP16591 822 aa19.03■□□□□ 0.64
NPHP4-210ENST00000506941 SOX9P48436 509 aa19.03■□□□□ 0.64
NPHP4-210ENST00000506941 TMEM31Q5JXX7 168 aa19.03■□□□□ 0.64
NPHP4-210ENST00000506941 CWF19L1Q69YN2 538 aaKnown RBP19.03■□□□□ 0.64
NPHP4-210ENST00000506941 FAM183BPQ6ZVS7 135 aa19.03■□□□□ 0.64
NPHP4-210ENST00000506941 RSRC2Q7L4I2 434 aaKnown RBP19.03■□□□□ 0.64
NPHP4-210ENST00000506941 BMP8AQ7Z5Y6 402 aa19.03■□□□□ 0.64
NPHP4-210ENST00000506941 TADA2BQ86TJ2 420 aa19.03■□□□□ 0.64
NPHP4-210ENST00000506941 CSGALNACT1Q8TDX6 532 aa19.03■□□□□ 0.64
NPHP4-210ENST00000506941 PBXIP1Q96AQ6 731 aa19.03■□□□□ 0.64
NPHP4-210ENST00000506941 NOX5Q96PH1 765 aa19.03■□□□□ 0.64
NPHP4-210ENST00000506941 PCDHB18PQ96TA0 734 aa19.03■□□□□ 0.64
NPHP4-210ENST00000506941 ABCC13Q9NSE7 274 aa19.03■□□□□ 0.64
NPHP4-210ENST00000506941 MARCH2Q9P0N8 246 aa19.03■□□□□ 0.64
NPHP4-210ENST00000506941 E2F8A0AVK6 867 aa19.02■□□□□ 0.64
NPHP4-210ENST00000506941 PRR33A8MZF0 331 aa19.02■□□□□ 0.64
NPHP4-210ENST00000506941 CYP1A1P04798 512 aaPredicted RBP19.02■□□□□ 0.64
NPHP4-210ENST00000506941 STARD6P59095 220 aa19.02■□□□□ 0.64
NPHP4-210ENST00000506941 PDGFRLQ15198 375 aa19.02■□□□□ 0.64
NPHP4-210ENST00000506941 TAF5Q15542 800 aa19.02■□□□□ 0.64
NPHP4-210ENST00000506941 NAA35Q5VZE5 725 aa19.02■□□□□ 0.64
NPHP4-210ENST00000506941 MSANTD2Q6P1R3 559 aa19.02■□□□□ 0.64
NPHP4-210ENST00000506941 TPRG1Q6ZUI0 275 aa19.02■□□□□ 0.64
NPHP4-210ENST00000506941 CPA5Q8WXQ8 436 aa19.02■□□□□ 0.64
NPHP4-210ENST00000506941 CHFRQ96EP1 664 aa19.02■□□□□ 0.64
NPHP4-210ENST00000506941 SYT11Q9BT88 431 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms