RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 MFAP3P55082 362 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 ADIGQ0VDE8 80 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 CNGA2Q16280 664 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 PKDCCQ504Y2 493 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 GJB7Q6PEY0 223 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 BBS7Q8IWZ6 715 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 SIX6OS1Q8N1H7 587 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 ZNF276Q8N554 614 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 WBP2Q969T9 261 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 FAM81BQ96LP2 452 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 ZSWIM1Q9BR11 485 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 KLF16Q9BXK1 252 aaPredicted RBP16.33■□□□□ 0.2
MED28-204ENST00000506409 ULBP1Q9BZM6 244 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 APEX2Q9UBZ4 518 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 CNTN6Q9UQ52 1028 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 VPS13AQ96RL7 3174 aa16.33■□□□□ 0.2
MED28-204ENST00000506409 GFRA3O60609 400 aa16.32■□□□□ 0.2
MED28-204ENST00000506409 PON1P27169 355 aa16.32■□□□□ 0.2
MED28-204ENST00000506409 YWHAGP61981 247 aaKnown RBP eCLIP16.32■□□□□ 0.2
MED28-204ENST00000506409 SATB1Q01826 763 aa16.32■□□□□ 0.2
MED28-204ENST00000506409 FBXO43Q4G163 708 aa16.32■□□□□ 0.2
MED28-204ENST00000506409 VWA3BQ502W6 1294 aa16.32■□□□□ 0.2
MED28-204ENST00000506409 PM20D1Q6GTS8 502 aa16.32■□□□□ 0.2
MED28-204ENST00000506409 RHBDF2Q6PJF5 856 aa16.32■□□□□ 0.2
MED28-204ENST00000506409 RSRC2Q7L4I2 434 aaKnown RBP16.32■□□□□ 0.2
MED28-204ENST00000506409 MIB1Q86YT6 1006 aa16.32■□□□□ 0.2
MED28-204ENST00000506409 SLC35F5Q8WV83 523 aa16.32■□□□□ 0.2
MED28-204ENST00000506409 KCTD13Q8WZ19 329 aa16.32■□□□□ 0.2
MED28-204ENST00000506409 SECISBP2LQ93073 1101 aaKnown RBP16.32■□□□□ 0.2
MED28-204ENST00000506409 TUBGCP2Q9BSJ2 902 aa16.32■□□□□ 0.2
MED28-204ENST00000506409 NDST4Q9H3R1 872 aa16.32■□□□□ 0.2
MED28-204ENST00000506409 SEMA4AQ9H3S1 761 aa16.32■□□□□ 0.2
MED28-204ENST00000506409 SAMSN1Q9NSI8 373 aaKnown RBP16.32■□□□□ 0.2
MED28-204ENST00000506409 ZSCAN32Q9NX65 697 aa16.32■□□□□ 0.2
MED28-204ENST00000506409 RASAL2Q9UJF2 1139 aa16.32■□□□□ 0.2
MED28-204ENST00000506409 LSM7Q9UK45 103 aaKnown RBP16.32■□□□□ 0.2
MED28-204ENST00000506409 NFE2L3Q9Y4A8 694 aa16.32■□□□□ 0.2
MED28-204ENST00000506409 PCDHGA2Q9Y5H1 932 aa16.32■□□□□ 0.2
MED28-204ENST00000506409 ZFHX2Q9C0A1 2572 aaPredicted RBP16.31■□□□□ 0.2
MED28-204ENST00000506409 PRR23AA6NEV1 266 aa16.31■□□□□ 0.2
MED28-204ENST00000506409 KCNJ18B7U540 433 aa16.31■□□□□ 0.2
MED28-204ENST00000506409 RNF40O75150 1001 aa16.31■□□□□ 0.2
MED28-204ENST00000506409 ADH5P11766 374 aa16.31■□□□□ 0.2
MED28-204ENST00000506409 OPRD1P41143 372 aa16.31■□□□□ 0.2
MED28-204ENST00000506409 RGS7P49802 495 aa16.31■□□□□ 0.2
MED28-204ENST00000506409 APBA1Q02410 837 aa16.31■□□□□ 0.2
MED28-204ENST00000506409 KCNJ12Q14500 433 aa16.31■□□□□ 0.2
MED28-204ENST00000506409 ARHGAP44Q17R89 818 aa16.31■□□□□ 0.2
MED28-204ENST00000506409 GAB4Q2WGN9 574 aa16.31■□□□□ 0.2
MED28-204ENST00000506409 MIIPQ5JXC2 388 aa16.31■□□□□ 0.2
MED28-204ENST00000506409 LY6G5CQ5SRR4 150 aa16.31■□□□□ 0.2
MED28-204ENST00000506409 SASS6Q6UVJ0 657 aa16.31■□□□□ 0.2
MED28-204ENST00000506409 HTR3DQ70Z44 454 aa16.31■□□□□ 0.2
MED28-204ENST00000506409 ASCL5Q7RTU5 278 aa16.31■□□□□ 0.2
MED28-204ENST00000506409 ENOX1Q8TC92 643 aaKnown RBP16.31■□□□□ 0.2
MED28-204ENST00000506409 ATRIPQ8WXE1 791 aa16.31■□□□□ 0.2
MED28-204ENST00000506409 FAM126AQ9BYI3 521 aaPredicted RBP16.31■□□□□ 0.2
MED28-204ENST00000506409 CNGB3Q9NQW8 809 aa16.31■□□□□ 0.2
MED28-204ENST00000506409 MYO15AQ9UKN7 3530 aa16.31■□□□□ 0.2
MED28-204ENST00000506409 PES1O00541 588 aaKnown RBP16.3■□□□□ 0.2
MED28-204ENST00000506409 GREM1O60565 184 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 ATG13O75143 517 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 LETM1O95202 739 aaPredicted RBP16.3■□□□□ 0.2
MED28-204ENST00000506409 PAPSS2O95340 614 aaPredicted RBP16.3■□□□□ 0.2
MED28-204ENST00000506409 TDGF1P13385 188 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 LCP1P13796 627 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 USP8P40818 1118 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 NRLP54845 237 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 COG7P83436 770 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 GAD2Q05329 585 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 EFEMP1Q12805 493 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 CCDC183Q5T5S1 534 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 BTBD8Q5XKL5 378 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 PMF1Q6P1K2 205 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 PKN3Q6P5Z2 889 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 BHLHA9Q7RTU4 235 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 ZBTB44Q8NCP5 570 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 NDRG1Q92597 394 aaKnown RBP16.3■□□□□ 0.2
MED28-204ENST00000506409 NELL1Q92832 810 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 SPHK2Q9NRA0 654 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 ANO10Q9NW15 660 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 C2orf42Q9NWW7 574 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 MARCH2Q9P0N8 246 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 STRIP2Q9ULQ0 834 aa16.3■□□□□ 0.2
MED28-204ENST00000506409 THAP12O43422 761 aa16.29■□□□□ 0.2
MED28-204ENST00000506409 MED7O43513 233 aa16.29■□□□□ 0.2
MED28-204ENST00000506409 STC2O76061 302 aa16.29■□□□□ 0.2
MED28-204ENST00000506409 EEF1GP26641 437 aaKnown RBP16.29■□□□□ 0.2
MED28-204ENST00000506409 GNA15P30679 374 aa16.29■□□□□ 0.2
MED28-204ENST00000506409 EIF2DP41214 584 aaKnown RBP16.29■□□□□ 0.2
MED28-204ENST00000506409 ANO4Q32M45 955 aa16.29■□□□□ 0.2
MED28-204ENST00000506409 TCP11X2Q5H9J9 407 aa16.29■□□□□ 0.2
MED28-204ENST00000506409 C12orf40Q86WS4 652 aa16.29■□□□□ 0.2
MED28-204ENST00000506409 TMEM25Q86YD3 366 aa16.29■□□□□ 0.2
MED28-204ENST00000506409 SCML4Q8N228 414 aa16.29■□□□□ 0.2
MED28-204ENST00000506409 CCDC26Q8TAB7 109 aa16.29■□□□□ 0.2
MED28-204ENST00000506409 EZH1Q92800 747 aaPredicted RBP16.29■□□□□ 0.2
MED28-204ENST00000506409 HSFY1Q96LI6 401 aa16.29■□□□□ 0.2
MED28-204ENST00000506409 PNKPQ96T60 521 aa16.29■□□□□ 0.2
MED28-204ENST00000506409 SIX2Q9NPC8 291 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms