RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 PLK2Q9NYY3 685 aa8.74□□□□□ -1.01
SNF8-204ENST00000506104 NUDT5Q9UKK9 219 aa8.74□□□□□ -1.01
SNF8-204ENST00000506104 NME7Q9Y5B8 376 aa8.74□□□□□ -1.01
SNF8-204ENST00000506104 EIF4E1BA6NMX2 242 aaKnown RBP8.73□□□□□ -1.01
SNF8-204ENST00000506104 ARHGAP33O14559 1287 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 MDM4O15151 490 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 TACC1O75410 805 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 CCDC130P13994 396 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 TYRP14679 529 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 NDUFV2P19404 249 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 CASP1P29466 404 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 EIF2DP41214 584 aaKnown RBP8.73□□□□□ -1.01
SNF8-204ENST00000506104 AFMP43652 599 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 DGKGP49619 791 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 MAP3K7CLP57077 242 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 AMPD3Q01432 767 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 ACAP1Q15027 740 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 TRIP6Q15654 476 aaKnown RBP8.73□□□□□ -1.01
SNF8-204ENST00000506104 ERICH6BQ5W0A0 696 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 LRSAM1Q6UWE0 723 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 FAM124AQ86V42 546 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 MIB1Q86YT6 1006 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 XXYLT1Q8NBI6 393 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 OTUB2Q96DC9 234 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 SMARCD1Q96GM5 515 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 TNIP3Q96KP6 325 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 CEP295NLQ96MC4 621 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 BLZF1Q9H2G9 400 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 SLC39A2Q9NP94 309 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 CD93Q9NPY3 652 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 TLR8Q9NR97 1041 aaKnown RBP8.73□□□□□ -1.01
SNF8-204ENST00000506104 AGPAT3Q9NRZ7 376 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 TFIP11Q9UBB9 837 aaKnown RBP8.73□□□□□ -1.01
SNF8-204ENST00000506104 MSRB2Q9Y3D2 182 aa8.73□□□□□ -1.01
SNF8-204ENST00000506104 IGF2RP11717 2491 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 IGHV1OR15-9A0A0B4J2B8 117 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 WASH3PC4AMC7 463 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 H0Y626 953 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 SYNCRIPO60506 623 aaKnown RBP8.72□□□□□ -1.01
SNF8-204ENST00000506104 TLR5O60602 858 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 ZNF217O75362 1048 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 TRIM16O95361 564 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 OLFM2O95897 454 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 TBX18O95935 607 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 TRIM21P19474 475 aaKnown RBP8.72□□□□□ -1.01
SNF8-204ENST00000506104 SYT1P21579 422 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 ARID5AQ03989 594 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 SCAPQ12770 1279 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 SEMA3BQ13214 749 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 STARD3Q14849 445 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 PSMD6Q15008 389 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 ZNF423Q2M1K9 1284 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 WDR45BQ5MNZ6 344 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 C10orf120Q5SQS8 335 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 TOGARAM2Q6ZUX3 1019 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 SLC41A1Q8IVJ1 513 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 ZCCHC9Q8N567 271 aaKnown RBP8.72□□□□□ -1.01
SNF8-204ENST00000506104 SLC2A14Q8TDB8 520 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 HNRNPLLQ8WVV9 542 aaKnown RBP8.72□□□□□ -1.01
SNF8-204ENST00000506104 ZNF516Q92618 1163 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 GPR174Q9BXC1 333 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 TMEM121BQ9BXQ6 578 aaPredicted RBP8.72□□□□□ -1.01
SNF8-204ENST00000506104 TRIM9Q9C026 710 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 MMRN2Q9H8L6 949 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 PRDM16Q9HAZ2 1276 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 RASAL2Q9UJF2 1139 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 WASF3Q9UPY6 502 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 TMEM131Q92545 1883 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 PTPRBP23467 1997 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 PCDH15Q96QU1 1955 aa8.72□□□□□ -1.01
SNF8-204ENST00000506104 FRMD3A2A2Y4 597 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 SPTLC2O15270 562 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 EIF3DO15371 548 aaKnown RBP eCLIP8.71□□□□□ -1.02
SNF8-204ENST00000506104 CYP26A1O43174 497 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 HOXC11O43248 304 aaPredicted RBP8.71□□□□□ -1.02
SNF8-204ENST00000506104 BEST1O76090 585 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 FTH1P19P0C7X4 201 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 ACADMP11310 421 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 NCAM1P13591 858 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 P4HA1P13674 534 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 CD59P13987 128 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 ACO1P21399 889 aaKnown RBP8.71□□□□□ -1.02
SNF8-204ENST00000506104 ATICP31939 592 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 ATP5C1P36542 298 aaKnown RBP8.71□□□□□ -1.02
SNF8-204ENST00000506104 PIK3CAP42336 1068 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 NCOA4Q13772 614 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 SLC39A14Q15043 492 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 SPDYCQ5MJ68 293 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 LIMS2Q7Z4I7 341 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 PIP4P1Q86T03 277 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 NAXDQ8IW45 347 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 ETFBKMTQ8IXQ9 262 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 PHTF2Q8N3S3 785 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 IQUBQ8NA54 791 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 OVCA2Q8WZ82 227 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 TOE1Q96GM8 510 aaKnown RBP8.71□□□□□ -1.02
SNF8-204ENST00000506104 ZFRQ96KR1 1074 aaKnown RBP8.71□□□□□ -1.02
SNF8-204ENST00000506104 SDCBP2Q9H190 292 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 TNMDQ9H2S6 317 aa8.71□□□□□ -1.02
SNF8-204ENST00000506104 FBXO44Q9H4M3 255 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms