RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 C1orf220Q5T0J3 134 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 C10orf76Q5T2E6 689 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 SH3PXD2AQ5TCZ1 1133 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 HTR3DQ70Z44 454 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 GPRIN1Q7Z2K8 1008 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 UNC93AQ86WB7 457 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 MIB1Q86YT6 1006 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 ZNF513Q8N8E2 541 aaPredicted RBP12.02□□□□□ -0.49
SIL1-208ENST00000505945 TMC2Q8TDI7 906 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 TMEM174Q8WUU8 243 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 TAF4BQ92750 862 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 JAKMIP2Q96AA8 810 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 SPACA7Q96KW9 195 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 KLF16Q9BXK1 252 aaPredicted RBP12.02□□□□□ -0.49
SIL1-208ENST00000505945 FBXO44Q9H4M3 255 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 TLR8Q9NR97 1041 aaKnown RBP12.02□□□□□ -0.49
SIL1-208ENST00000505945 OSER1Q9NX31 292 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 HCN2Q9UL51 889 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 PI4KAP42356 2102 aa12.02□□□□□ -0.49
SIL1-208ENST00000505945 ASCC3Q8N3C0 2202 aaKnown RBP12.02□□□□□ -0.49
SIL1-208ENST00000505945 FRYQ5TBA9 3013 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 NEDD8-MDP1E9PL57 170 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 IKBKBO14920 756 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 GREM1O60565 184 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 HLA-DRAP01903 254 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 PFKFB1P16118 471 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 GABRG2P18507 467 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 ATP5C1P36542 298 aaKnown RBP12.01□□□□□ -0.49
SIL1-208ENST00000505945 PIK3CAP42336 1068 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 ASPAP45381 313 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 PREPLQ4J6C6 727 aaPredicted RBP12.01□□□□□ -0.49
SIL1-208ENST00000505945 TPGS1Q6ZTW0 290 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 NUDT18Q6ZVK8 323 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 SYT12Q8IV01 421 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 HSCBQ8IWL3 235 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 DEFB119Q8N690 84 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 TERB1Q8NA31 727 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 KCNV2Q8TDN2 545 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 ERLEC1Q96DZ1 483 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 CYFIP2Q96F07 1278 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 TWNKQ96RR1 684 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 DUSP9Q99956 384 aaKnown RBP12.01□□□□□ -0.49
SIL1-208ENST00000505945 BBS2Q9BXC9 721 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 CYLDQ9NQC7 956 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 DNAJC17Q9NVM6 304 aaKnown RBP12.01□□□□□ -0.49
SIL1-208ENST00000505945 NUDT5Q9UKK9 219 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 SCML2Q9UQR0 700 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 FRMD4BQ9Y2L6 1034 aa12.01□□□□□ -0.49
SIL1-208ENST00000505945 HHLA1C9JL84 531 aa12□□□□□ -0.49
SIL1-208ENST00000505945 MDM4O15151 490 aa12□□□□□ -0.49
SIL1-208ENST00000505945 CYP26A1O43174 497 aa12□□□□□ -0.49
SIL1-208ENST00000505945 FAM200BP0CF97 657 aa12□□□□□ -0.49
SIL1-208ENST00000505945 HOXB2P14652 356 aa12□□□□□ -0.49
SIL1-208ENST00000505945 ACO1P21399 889 aaKnown RBP12□□□□□ -0.49
SIL1-208ENST00000505945 ITPKAP23677 461 aa12□□□□□ -0.49
SIL1-208ENST00000505945 CMA1P23946 247 aa12□□□□□ -0.49
SIL1-208ENST00000505945 NTSR1P30989 418 aa12□□□□□ -0.49
SIL1-208ENST00000505945 MAPK8P45983 427 aa12□□□□□ -0.49
SIL1-208ENST00000505945 VAMP7P51809 220 aa12□□□□□ -0.49
SIL1-208ENST00000505945 ZNF252P-AS1Q0IIN9 211 aa12□□□□□ -0.49
SIL1-208ENST00000505945 FOXC1Q12948 553 aa12□□□□□ -0.49
SIL1-208ENST00000505945 BYSLQ13895 437 aaKnown RBP12□□□□□ -0.49
SIL1-208ENST00000505945 LYSMD4Q5XG99 296 aa12□□□□□ -0.49
SIL1-208ENST00000505945 EGFLAMQ63HQ2 1017 aa12□□□□□ -0.49
SIL1-208ENST00000505945 GRAMD4Q6IC98 578 aa12□□□□□ -0.49
SIL1-208ENST00000505945 CLEC20AQ6ZU45 233 aa12□□□□□ -0.49
SIL1-208ENST00000505945 TRMT11Q7Z4G4 463 aaKnown RBP12□□□□□ -0.49
SIL1-208ENST00000505945 ACOX2Q99424 681 aa12□□□□□ -0.49
SIL1-208ENST00000505945 HNRNPABQ99729 332 aaKnown RBP12□□□□□ -0.49
SIL1-208ENST00000505945 NUSAP1Q9BXS6 441 aaKnown RBP12□□□□□ -0.49
SIL1-208ENST00000505945 NMUR1Q9HB89 426 aa12□□□□□ -0.49
SIL1-208ENST00000505945 EVLQ9UI08 416 aaPredicted RBP12□□□□□ -0.49
SIL1-208ENST00000505945 MAPK8IP1Q9UQF2 711 aa12□□□□□ -0.49
SIL1-208ENST00000505945 STARD13Q9Y3M8 1113 aa12□□□□□ -0.49
SIL1-208ENST00000505945 ATXN2Q99700 1313 aaKnown RBP12□□□□□ -0.49
SIL1-208ENST00000505945 CACNA1EQ15878 2313 aa12□□□□□ -0.49
SIL1-208ENST00000505945 IGF2RP11717 2491 aa12□□□□□ -0.49
SIL1-208ENST00000505945 CFAP47Q6ZTR5 3102 aa12□□□□□ -0.49
SIL1-208ENST00000505945 A0A1W2PQF6 199 aa11.99□□□□□ -0.49
SIL1-208ENST00000505945 A0A1W2PQH9 124 aa11.99□□□□□ -0.49
SIL1-208ENST00000505945 CALUO43852 315 aaPredicted RBP11.99□□□□□ -0.49
SIL1-208ENST00000505945 CACNG3O60359 315 aa11.99□□□□□ -0.49
SIL1-208ENST00000505945 TOP3BO95985 862 aaKnown RBP11.99□□□□□ -0.49
SIL1-208ENST00000505945 TRIM49P0CI25 452 aa11.99□□□□□ -0.49
SIL1-208ENST00000505945 TRIM49CP0CI26 452 aa11.99□□□□□ -0.49
SIL1-208ENST00000505945 RARGP13631 454 aa11.99□□□□□ -0.49
SIL1-208ENST00000505945 CEACAM1P13688 526 aa11.99□□□□□ -0.49
SIL1-208ENST00000505945 TYRP14679 529 aa11.99□□□□□ -0.49
SIL1-208ENST00000505945 ENGP17813 658 aa11.99□□□□□ -0.49
SIL1-208ENST00000505945 SPINK2P20155 84 aa11.99□□□□□ -0.49
SIL1-208ENST00000505945 CSRP1P21291 193 aaKnown RBP11.99□□□□□ -0.49
SIL1-208ENST00000505945 GCLMP48507 274 aa11.99□□□□□ -0.49
SIL1-208ENST00000505945 RPL6Q02878 288 aaKnown RBP11.99□□□□□ -0.49
SIL1-208ENST00000505945 PPP3CAQ08209 521 aa11.99□□□□□ -0.49
SIL1-208ENST00000505945 INCA1Q0VD86 236 aa11.99□□□□□ -0.49
SIL1-208ENST00000505945 LMAN2Q12907 356 aa11.99□□□□□ -0.49
SIL1-208ENST00000505945 SPDYCQ5MJ68 293 aa11.99□□□□□ -0.49
SIL1-208ENST00000505945 TOGARAM2Q6ZUX3 1019 aa11.99□□□□□ -0.49
SIL1-208ENST00000505945 CHPFQ8IZ52 775 aa11.99□□□□□ -0.49
SIL1-208ENST00000505945 DEFB124Q8NES8 71 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms