RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 PLD4Q96BZ4 506 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 KREMEN1Q96MU8 473 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 FAM83CQ9BQN1 747 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 DDX23Q9BUQ8 820 aaKnown RBP10.34□□□□□ -0.75
NR1I3-220ENST00000505005 LSM14BQ9BX40 385 aaKnown RBP10.34□□□□□ -0.75
NR1I3-220ENST00000505005 SYNCQ9H7C4 482 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 ST7Q9NRC1 585 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.34□□□□□ -0.75
NR1I3-220ENST00000505005 TAB2Q9NYJ8 693 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 WDR35Q9P2L0 1181 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 CPQQ9Y646 472 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 BZW2Q9Y6E2 419 aaKnown RBP10.34□□□□□ -0.75
NR1I3-220ENST00000505005 ANAPC1Q9H1A4 1944 aa10.34□□□□□ -0.75
NR1I3-220ENST00000505005 TYW5A2RUC4 315 aaKnown RBP10.33□□□□□ -0.76
NR1I3-220ENST00000505005 LEFTY2O00292 366 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 FOXN3O00409 490 aaPredicted RBP10.33□□□□□ -0.76
NR1I3-220ENST00000505005 BEST1O76090 585 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 FERP16591 822 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 SOX5P35711 763 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 GPD2P43304 727 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 PTPN5P54829 565 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 NRLP54845 237 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 USP46P62068 366 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 GAD2Q05329 585 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 KCNMA1Q12791 1236 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 ORC1Q13415 861 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 NCAPHQ15003 741 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 TSR1Q2NL82 804 aaKnown RBP10.33□□□□□ -0.76
NR1I3-220ENST00000505005 HSF5Q4G112 596 aaPredicted RBP10.33□□□□□ -0.76
NR1I3-220ENST00000505005 FIGNQ5HY92 759 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 NUGGCQ68CJ6 796 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 TPRG1Q6ZUI0 275 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 VPS36Q86VN1 386 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 TTC30AQ86WT1 665 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 CCDC117Q8IWD4 279 aaPredicted RBP10.33□□□□□ -0.76
NR1I3-220ENST00000505005 FLCNQ8NFG4 579 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 AZIN2Q96A70 460 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 SERPINB11Q96P15 392 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 XPO6Q96QU8 1125 aaKnown RBP10.33□□□□□ -0.76
NR1I3-220ENST00000505005 PPP1R9BQ96SB3 815 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 FUCA2Q9BTY2 467 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 FAM126AQ9BYI3 521 aaPredicted RBP10.33□□□□□ -0.76
NR1I3-220ENST00000505005 SEMA4AQ9H3S1 761 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 TBC1D17Q9HA65 648 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 GMIPQ9P107 970 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.33□□□□□ -0.76
NR1I3-220ENST00000505005 PIAS3Q9Y6X2 628 aa10.33□□□□□ -0.76
NR1I3-220ENST00000505005 OBSL1O75147 1896 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 C2orf78A6NCI8 922 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 TRDMT1O14717 391 aaKnown RBP10.32□□□□□ -0.76
NR1I3-220ENST00000505005 NPC1O15118 1278 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 CYP26A1O43174 497 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 IRAK2O43187 625 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 COCHO43405 550 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 NARSO43776 548 aaKnown RBP10.32□□□□□ -0.76
NR1I3-220ENST00000505005 LRRN2O75325 713 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 TADA3O75528 432 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 F9P00740 461 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 LTFP02788 710 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 PYGBP11216 843 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 CYP11B1P15538 503 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 BRD2P25440 801 aaKnown RBP10.32□□□□□ -0.76
NR1I3-220ENST00000505005 CACNA2D1P54289 1103 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 UBASH3AP57075 661 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 DAOAP59103 153 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 POLR2FP61218 127 aaKnown RBP10.32□□□□□ -0.76
NR1I3-220ENST00000505005 YWHAZP63104 245 aaKnown RBP10.32□□□□□ -0.76
NR1I3-220ENST00000505005 RING1Q06587 406 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 ADIGQ0VDE8 80 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 TRIM14Q14142 442 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 GRM2Q14416 872 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 IQCB1Q15051 598 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 HSP90AA4PQ58FG1 418 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 STXBP5Q5T5C0 1151 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 BSPRYQ5W0U4 402 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 ZC3H14Q6PJT7 736 aaKnown RBP10.32□□□□□ -0.76
NR1I3-220ENST00000505005 LRSAM1Q6UWE0 723 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 HFE2Q6ZVN8 426 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 ARCQ7LC44 396 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 DHX40Q8IX18 779 aaKnown RBP10.32□□□□□ -0.76
NR1I3-220ENST00000505005 PJA1Q8NG27 643 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 UBA3Q8TBC4 463 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 SECISBP2LQ93073 1101 aaKnown RBP10.32□□□□□ -0.76
NR1I3-220ENST00000505005 PPP1R13BQ96KQ4 1090 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 CYP2S1Q96SQ9 504 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 RPP25Q9BUL9 199 aaKnown RBP10.32□□□□□ -0.76
NR1I3-220ENST00000505005 NAA15Q9BXJ9 866 aaKnown RBP10.32□□□□□ -0.76
NR1I3-220ENST00000505005 SLC4A5Q9BY07 1137 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 PLA2G2FQ9BZM2 168 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 ULBP1Q9BZM6 244 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 TSPY26PQ9H489 355 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 ECT2Q9H8V3 914 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 POPDC2Q9HBU9 364 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 LTB4R2Q9NPC1 389 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 FAM207AQ9NSI2 230 aaPredicted RBP10.32□□□□□ -0.76
NR1I3-220ENST00000505005 MARCH2Q9P0N8 246 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 CA14Q9ULX7 337 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 STAP1Q9ULZ2 295 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 PATJQ8NI35 1801 aa10.32□□□□□ -0.76
NR1I3-220ENST00000505005 A0A1B0GTH6 734 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms