RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 E2F5Q15329 346 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 ZC3H12AQ5D1E8 599 aaKnown RBP14.59□□□□□ -0.07
TCOF1-207ENST00000504761 PLEKHO2Q8TD55 490 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 GPR152Q8TDT2 470 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 TFAP2BQ92481 460 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 MOSPD1Q9UJG1 213 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 GOLGA4Q13439 2230 aaKnown RBP14.59□□□□□ -0.07
TCOF1-207ENST00000504761 USP12O75317 370 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 LRG1P02750 347 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 MMP8P22894 467 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 GTF2A1P52655 376 aaPredicted RBP14.59□□□□□ -0.07
TCOF1-207ENST00000504761 SLC39A4Q6P5W5 647 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 HIPK4Q8NE63 616 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 SENP1Q9P0U3 644 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 NCANO14594 1321 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 RBAK-RBAKDNI3L0D1 243 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 FKTNO75072 461 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 AOC2O75106 756 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 MBL2P11226 248 aaPredicted RBP14.59□□□□□ -0.07
TCOF1-207ENST00000504761 RPL10AP62906 217 aaKnown RBP14.59□□□□□ -0.07
TCOF1-207ENST00000504761 AGBL2Q5U5Z8 902 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 KATNAL2Q8IYT4 538 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 ANKRD52Q8NB46 1076 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 FAM136AQ96C01 138 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 LRRC37BQ96QE4 947 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 TKTL2Q9H0I9 626 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 ATXN3LQ9H3M9 355 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 FZD8Q9H461 694 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 CCDC88AQ3V6T2 1871 aa14.59□□□□□ -0.07
TCOF1-207ENST00000504761 RASSF10A6NK89 507 aa14.58□□□□□ -0.07
TCOF1-207ENST00000504761 H7C4K7 107 aa14.58□□□□□ -0.07
TCOF1-207ENST00000504761 CABYRO75952 493 aa14.58□□□□□ -0.07
TCOF1-207ENST00000504761 TPH1P17752 444 aa14.58□□□□□ -0.07
TCOF1-207ENST00000504761 CCR1P32246 355 aa14.58□□□□□ -0.07
TCOF1-207ENST00000504761 ARFIP2P53365 341 aa14.58□□□□□ -0.07
TCOF1-207ENST00000504761 ZNF662Q6ZS27 426 aa14.58□□□□□ -0.07
TCOF1-207ENST00000504761 TMC3Q7Z5M5 1100 aa14.58□□□□□ -0.07
TCOF1-207ENST00000504761 COLGALT1Q8NBJ5 622 aa14.58□□□□□ -0.07
TCOF1-207ENST00000504761 ROPN1BQ9BZX4 212 aaPredicted RBP14.58□□□□□ -0.07
TCOF1-207ENST00000504761 ROPN1Q9HAT0 212 aaPredicted RBP14.58□□□□□ -0.07
TCOF1-207ENST00000504761 POPDC2Q9HBU9 364 aa14.58□□□□□ -0.07
TCOF1-207ENST00000504761 TRPM5Q9NZQ8 1165 aa14.58□□□□□ -0.07
TCOF1-207ENST00000504761 AFF4Q9UHB7 1163 aaKnown RBP14.58□□□□□ -0.07
TCOF1-207ENST00000504761 PRRC2BQ5JSZ5 2229 aaKnown RBP14.58□□□□□ -0.07
TCOF1-207ENST00000504761 H0Y626 953 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 CA12O43570 354 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 TTC4O95801 387 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 SNRPAP09012 282 aaKnown RBP14.58□□□□□ -0.08
TCOF1-207ENST00000504761 SLC2A3P11169 496 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 ERFP50548 548 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 STX1BP61266 288 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 OCRLQ01968 901 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 DNAJC3Q13217 504 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 LVRNQ6Q4G3 990 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 CPNE8Q86YQ8 564 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 CDC26Q8NHZ8 85 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 EPN3Q9H201 632 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 TRMT13Q9NUP7 481 aaKnown RBP14.58□□□□□ -0.08
TCOF1-207ENST00000504761 LMCD1Q9NZU5 365 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 SLC27A5Q9Y2P5 690 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 CHD4Q14839 1912 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 TAC1P20366 129 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 TGM2P21980 687 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 GRK4P32298 578 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 SLC11A2P49281 568 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 GEMIN4P57678 1058 aaKnown RBP14.58□□□□□ -0.08
TCOF1-207ENST00000504761 RAD51Q06609 339 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 NAA25Q14CX7 972 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 OLFML2BQ68BL8 750 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 BLOC1S5Q8TDH9 187 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 ZBED3Q96IU2 234 aaPredicted RBP14.58□□□□□ -0.08
TCOF1-207ENST00000504761 TBCBQ99426 244 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 SNRNP25Q9BV90 132 aaKnown RBP14.58□□□□□ -0.08
TCOF1-207ENST00000504761 PCDH9Q9HC56 1237 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 XAB2Q9HCS7 855 aaKnown RBP14.58□□□□□ -0.08
TCOF1-207ENST00000504761 NDFIP2Q9NV92 336 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 SLC39A10Q9ULF5 831 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 TCRBV7S2A1N4TA0A589 114 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 ATP4AP20648 1035 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 ZNF143P52747 638 aaPredicted RBP14.58□□□□□ -0.08
TCOF1-207ENST00000504761 TPD52P55327 224 aaPredicted RBP14.58□□□□□ -0.08
TCOF1-207ENST00000504761 CDH18Q13634 790 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 MORF4L2Q15014 288 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 SGF29Q96ES7 293 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 ZMYM2Q9UBW7 1377 aa14.58□□□□□ -0.08
TCOF1-207ENST00000504761 F5H5T6 163 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 MTSS1O43312 755 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 ERBB2P04626 1255 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 NOMO2Q5JPE7 1267 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 NAPEPLDQ6IQ20 393 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 CES3Q6UWW8 571 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 ARHGAP18Q8N392 663 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 LRRC52Q8N7C0 313 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 ZNF473Q8WTR7 871 aaKnown RBP14.57□□□□□ -0.08
TCOF1-207ENST00000504761 DDX50Q9BQ39 737 aaKnown RBP14.57□□□□□ -0.08
TCOF1-207ENST00000504761 ERVK-5Q9HDB9 667 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 NPHS2Q9NP85 383 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-207ENST00000504761 APOBEC2Q9Y235 224 aaKnown RBP14.57□□□□□ -0.08
TCOF1-207ENST00000504761 COL1A2P08123 1366 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms