RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 NMT2O60551 498 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 THEMIS2Q5TEJ8 643 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 ZSWIM1Q9BR11 485 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 PRDM5Q9NQX1 630 aaPredicted RBP6.26□□□□□ -1.41
LINC02397-201ENST00000504409 SH3BP4Q9P0V3 963 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 HESX1Q9UBX0 185 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 SEPT9Q9UHD8 586 aaPredicted RBP6.26□□□□□ -1.41
LINC02397-201ENST00000504409 SLX4Q8IY92 1834 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 ROBO3Q96MS0 1386 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 TRIM64A6NGJ6 449 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 TRIM64BA6NI03 449 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 ZNF263O14978 683 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 IFNB1P01574 187 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 POLBP06746 335 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 PHKA1P46020 1223 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 PIK3CGP48736 1102 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 NR2C2P49116 596 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 GMPSP49915 693 aaPredicted RBP6.26□□□□□ -1.41
LINC02397-201ENST00000504409 KCNK10P57789 538 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 KRT33BQ14525 404 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 FAM189A2Q15884 450 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 SEL1L3Q68CR1 1132 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 TMEM17Q86X19 198 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 TBC1D21Q8IYX1 336 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 LRRC34Q8IZ02 419 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 ZBED8Q8IZ13 594 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 SDR16C5Q8N3Y7 309 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 ATP6V1E2Q96A05 226 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 ZNF597Q96LX8 424 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 PCDH9Q9HC56 1237 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 SAMSN1Q9NSI8 373 aaKnown RBP6.26□□□□□ -1.41
LINC02397-201ENST00000504409 ADGRB1O14514 1584 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 SH3D21A4FU49 640 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 TRIM43BA6NCK2 446 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 USP27XA6NNY8 438 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 NOL4O94818 638 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 MPP1Q00013 466 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 PLA2G4EQ3MJ16 856 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 ZSCAN29Q8IWY8 852 aaPredicted RBP6.26□□□□□ -1.41
LINC02397-201ENST00000504409 ZCCHC9Q8N567 271 aaKnown RBP6.26□□□□□ -1.41
LINC02397-201ENST00000504409 TBC1D15Q8TC07 691 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 RNF145Q96MT1 663 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 AGAP3Q96P47 875 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 SLC12A6Q9UHW9 1150 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 XPO7Q9UIA9 1087 aaKnown RBP6.26□□□□□ -1.41
LINC02397-201ENST00000504409 CLIC4Q9Y696 253 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 CCDC88AQ3V6T2 1871 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 C2orf71A6NGG8 1288 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 ORC5O43913 435 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 PRPSAP2O60256 369 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 PLEKHA8P1O95397 391 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 LYNP07948 512 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 DRD4P21917 467 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 ALDH1A3P47895 512 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 IFRD2Q12894 506 aaPredicted RBP6.26□□□□□ -1.41
LINC02397-201ENST00000504409 PHKG1Q16816 387 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 KIF19Q2TAC6 998 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 ALFQ53S48 1182 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 FAM47EQ6ZV65 393 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 IQCKQ8N0W5 287 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 TMEM35BQ8NCS4 154 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 C9orf43Q8TAL5 461 aaPredicted RBP6.26□□□□□ -1.41
LINC02397-201ENST00000504409 SLCO2A1Q92959 643 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 PGBD1Q96JS3 809 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 STON1Q9Y6Q2 735 aa6.26□□□□□ -1.41
LINC02397-201ENST00000504409 ZNF174Q15697 407 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 VWA5B1Q5TIE3 1220 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 LRRC38Q5VT99 294 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 MYCT1Q8N699 235 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 CYGBQ8WWM9 190 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 CCDC17Q96LX7 622 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 PKD2L1Q9P0L9 805 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 SPEF1Q9Y4P9 236 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 DDX3XO00571 662 aaKnown RBP eCLIP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 ITGA2P17301 1181 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 CD40LGP29965 261 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 FRG1Q14331 258 aaKnown RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 KCTD6Q8NC69 237 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 ANGPTL6Q8NI99 470 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 GON7Q9BXV9 100 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 RAB23Q9ULC3 237 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 INPP5FQ9Y2H2 1132 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 PTPN22Q9Y2R2 807 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 IRS2Q9Y4H2 1338 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 RAD51CO43502 376 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 MAPTP10636 758 aaKnown RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 ZNF23P17027 643 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 ITGALP20701 1170 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 IFNGR2P38484 337 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 CCT3P49368 545 aaKnown RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 VBP1P61758 197 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 PTK6Q13882 451 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 EIF4A2Q14240 407 aaKnown RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 PTGR1Q14914 329 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 PDK2Q15119 407 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 SYT16Q17RD7 645 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 INTS11Q5TA45 600 aaKnown RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 UGT3A1Q6NUS8 523 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 CDC73Q6P1J9 531 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 DHRSXQ8N5I4 330 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms