RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 ZSWIM2Q8NEG5 633 aa9.65□□□□□ -0.86
DHFR-202ENST00000504396 ERLEC1Q96DZ1 483 aa9.65□□□□□ -0.86
DHFR-202ENST00000504396 ANKRD36BP1Q96IX9 119 aa9.65□□□□□ -0.86
DHFR-202ENST00000504396 FNBP1Q96RU3 617 aa9.65□□□□□ -0.86
DHFR-202ENST00000504396 MMS19Q96T76 1030 aa9.65□□□□□ -0.86
DHFR-202ENST00000504396 PKMYT1Q99640 499 aa9.65□□□□□ -0.86
DHFR-202ENST00000504396 KIF2CQ99661 725 aa9.65□□□□□ -0.86
DHFR-202ENST00000504396 PCIF1Q9H4Z3 704 aa9.65□□□□□ -0.86
DHFR-202ENST00000504396 TMEM74BQ9NUR3 256 aa9.65□□□□□ -0.86
DHFR-202ENST00000504396 STK17AQ9UEE5 414 aa9.65□□□□□ -0.86
DHFR-202ENST00000504396 NEUROG3Q9Y4Z2 214 aa9.65□□□□□ -0.86
DHFR-202ENST00000504396 CEP295Q9C0D2 2601 aa9.65□□□□□ -0.86
DHFR-202ENST00000504396 TNRC6BQ9UPQ9 1833 aaKnown RBP9.65□□□□□ -0.86
DHFR-202ENST00000504396 PTPRDP23468 1912 aa9.65□□□□□ -0.86
DHFR-202ENST00000504396 ADAMTS9Q9P2N4 1935 aa9.65□□□□□ -0.86
DHFR-202ENST00000504396 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.65□□□□□ -0.87
DHFR-202ENST00000504396 KIAA0391O15091 583 aaKnown RBP9.65□□□□□ -0.87
DHFR-202ENST00000504396 AP5Z1O43299 807 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 OPHN1O60890 802 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 TNNC2P02585 160 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 RHOQP17081 205 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 GAP43P17677 238 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 GARTP22102 1010 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 ITPKAP23677 461 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 LMO2P25791 158 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 EIF2DP41214 584 aaKnown RBP9.65□□□□□ -0.87
DHFR-202ENST00000504396 PPP3CCP48454 512 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 CLN3Q13286 438 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 RABEP1Q15276 862 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 MAPRE1Q15691 268 aaKnown RBP9.65□□□□□ -0.87
DHFR-202ENST00000504396 SOWAHAQ2M3V2 549 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 OXLD1Q5BKU9 147 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 MDH1BQ5I0G3 518 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 SPDYCQ5MJ68 293 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 L1TD1Q5T7N2 865 aaKnown RBP9.65□□□□□ -0.87
DHFR-202ENST00000504396 EMC10Q5UCC4 262 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 BTBD8Q5XKL5 378 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 SCARA3Q6AZY7 606 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 VSTM1Q6UX27 236 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 C12orf40Q86WS4 652 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 NAT16Q8N8M0 369 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 OLIG1Q8TAK6 271 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 HPDLQ96IR7 371 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 SPATA17Q96L03 361 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 SLITRK1Q96PX8 696 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 STRA6Q9BX79 667 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 SNX25Q9H3E2 840 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 PDE11AQ9HCR9 933 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 CCDC39Q9UFE4 941 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 MBD1Q9UIS9 605 aaPredicted RBP9.65□□□□□ -0.87
DHFR-202ENST00000504396 CDH9Q9ULB4 789 aa9.65□□□□□ -0.87
DHFR-202ENST00000504396 TBC1D3BA6NDS4 549 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 ZNF840PA6NDX5 716 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 F8VP50 259 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 GABRDO14764 452 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 SOX11P35716 441 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 TXLNAP40222 546 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 GRIA2P42262 883 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 WASP42768 502 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 ZXDBP98169 803 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 TAF10Q12962 218 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 SF3A1Q15459 793 aaKnown RBP9.64□□□□□ -0.87
DHFR-202ENST00000504396 DUOXA1Q1HG43 343 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 GAB4Q2WGN9 574 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 ANO4Q32M45 955 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 C10orf76Q5T2E6 689 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 TDRD10Q5VZ19 366 aaKnown RBP9.64□□□□□ -0.87
DHFR-202ENST00000504396 SLC23A3Q6PIS1 610 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 LRSAM1Q6UWE0 723 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 TRMT11Q7Z4G4 463 aaKnown RBP9.64□□□□□ -0.87
DHFR-202ENST00000504396 DDX42Q86XP3 938 aaKnown RBP eCLIP9.64□□□□□ -0.87
DHFR-202ENST00000504396 CHCHD4Q8N4Q1 142 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 MINDY1Q8N5J2 469 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 ZNF513Q8N8E2 541 aaPredicted RBP9.64□□□□□ -0.87
DHFR-202ENST00000504396 PCED1BQ96HM7 432 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 EPSTI1Q96J88 318 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 CBWD1Q9BRT8 395 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 NACA2Q9H009 215 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 RNF38Q9H0F5 515 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 CRTAC1Q9NQ79 661 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 OLFML3Q9NRN5 406 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 SIX4Q9UIU6 781 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 PILRBQ9UKJ0 227 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 SLC6A14Q9UN76 642 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 SMC3Q9UQE7 1217 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 MSRB2Q9Y3D2 182 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 SH3BP1Q9Y3L3 701 aa9.64□□□□□ -0.87
DHFR-202ENST00000504396 CEP192Q8TEP8 1941 aa9.63□□□□□ -0.87
DHFR-202ENST00000504396 H0Y626 953 aa9.63□□□□□ -0.87
DHFR-202ENST00000504396 ADAM23O75077 832 aa9.63□□□□□ -0.87
DHFR-202ENST00000504396 PRPF6O94906 941 aaKnown RBP9.63□□□□□ -0.87
DHFR-202ENST00000504396 TRIM16O95361 564 aa9.63□□□□□ -0.87
DHFR-202ENST00000504396 IRF1P10914 325 aa9.63□□□□□ -0.87
DHFR-202ENST00000504396 HOXB2P14652 356 aa9.63□□□□□ -0.87
DHFR-202ENST00000504396 GPC1P35052 558 aa9.63□□□□□ -0.87
DHFR-202ENST00000504396 CASP5P51878 434 aa9.63□□□□□ -0.87
DHFR-202ENST00000504396 SLC7A9P82251 487 aa9.63□□□□□ -0.87
DHFR-202ENST00000504396 GAD2Q05329 585 aa9.63□□□□□ -0.87
DHFR-202ENST00000504396 MESP2Q0VG99 397 aa9.63□□□□□ -0.87
DHFR-202ENST00000504396 SEMA3BQ13214 749 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms