RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, human

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2J3-209	ENST00000504157	FBXL18	Q96ME1	805 aa		18.5	■□□□□ 0.55
POLR2J3-209	ENST00000504157	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	18.5	■□□□□ 0.55
POLR2J3-209	ENST00000504157	IP6K2	Q9UHH9	426 aa		18.5	■□□□□ 0.55
POLR2J3-209	ENST00000504157	EXOC7	Q9UPT5	735 aa		18.5	■□□□□ 0.55
POLR2J3-209	ENST00000504157	SOBP	A7XYQ1	873 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	KRT10	P13645	584 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	HSPA13	P48723	471 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	COPA	P53621	1224 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	C1QBP	Q07021	282 aa	Known RBP	18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	ACAP1	Q15027	740 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	RWDD4	Q6NW29	188 aa	Known RBP	18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	LLGL2	Q6P1M3	1020 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	MFSD7	Q6UXD7	560 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	SPOCD1	Q6ZMY3	1216 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	LPCAT2	Q7L5N7	544 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	AMIGO2	Q86SJ2	522 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	SIAH1	Q8IUQ4	282 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	SLC35B2	Q8TB61	432 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	USP6NL	Q92738	828 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	CCDC124	Q96CT7	223 aa	Known RBP	18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	RILP	Q96NA2	401 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	SLC2A11	Q9BYW1	496 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	LIN28A	Q9H9Z2	209 aa	Known RBP	18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	IGSF9	Q9P2J2	1179 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	TRIM17	Q9Y577	477 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	SQOR	Q9Y6N5	450 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	PIAS1	O75925	651 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	WASHC5	Q12768	1159 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	TEX44	Q53QW1	395 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	FNBP1L	Q5T0N5	605 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	RARS2	Q5T160	578 aa	Known RBP	18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	DCDC5	Q6ZRR9	648 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	NANOGNB	Q7Z5D8	188 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	HIPK4	Q8NE63	616 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	RAB3IL1	Q8TBN0	382 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	SLC44A1	Q8WWI5	657 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	CPT1B	Q92523	772 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	CASP10	Q92851	521 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	RANBP9	Q96S59	729 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	RIT2	Q99578	217 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	ZNF577	Q9BSK1	485 aa		18.49	■□□□□ 0.55
POLR2J3-209	ENST00000504157	hCG_1818297	A0A087WSY0	165 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	GOLGA8IP	A6NC78	632 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	GOLGA8J	A6NMD2	632 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	KLHL2	O95198	593 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	KRT1	P04264	644 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	PRDX6	P30041	224 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	NOMO3	P69849	1222 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	TMPRSS15	P98073	1019 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	CCDC153	Q494R4	210 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	ANKDD1A	Q495B1	522 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	MSS51	Q4VC12	460 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	TRAPPC3L	Q5T215	181 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	CRLF3	Q8IUI8	442 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	FBXW8	Q8N3Y1	598 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	FBXO36	Q8NEA4	188 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	FEZF2	Q8TBJ5	459 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	E2F7	Q96AV8	911 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	DHRS1	Q96LJ7	313 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	SRPK1	Q96SB4	655 aa	Known RBP	18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	CGREF1	Q99674	301 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	SENP7	Q9BQF6	1050 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	EHMT1	Q9H9B1	1298 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	SLC38A7	Q9NVC3	462 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	SIRPG	Q9P1W8	387 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	DOLK	Q9UPQ8	538 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	CLEC11A	Q9Y240	323 aa		18.48	■□□□□ 0.55
POLR2J3-209	ENST00000504157	TLR3	O15455	904 aa	Known RBP	18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	PROC	P04070	461 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	DSG3	P32926	999 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	PTK7	Q13308	1070 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	CES4A	Q5XG92	561 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	KAZN	Q674X7	775 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	SV2A	Q7L0J3	742 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	ADCY4	Q8NFM4	1077 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	TSPAN14	Q8NG11	270 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	CCDC127	Q96BQ5	260 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	SGF29	Q96ES7	293 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	PARVA	Q9NVD7	372 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	UST	Q9Y2C2	406 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	GPC6	Q9Y625	555 aa	Predicted RBP	18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	RGPD3	A6NKT7	1758 aa	Predicted RBP	18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	RGPD4	Q7Z3J3	1758 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	SGK1	O00141	431 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	NDUFB10	O96000	172 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	OCM2	P0CE71	109 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	OCM	P0CE72	109 aa	Predicted RBP	18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	ATF7	P17544	494 aa	Predicted RBP	18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	GJC1	P36383	396 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	CBLB	Q13191	982 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	PSMD6	Q15008	389 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	TFDP3	Q5H9I0	405 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	ILDR2	Q71H61	639 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	HPS6	Q86YV9	775 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	RHPN2	Q8IUC4	686 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	PALM2	Q8IXS6	379 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	APBB2	Q92870	758 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	BORCS5	Q969J3	196 aa		18.47	■□□□□ 0.55
POLR2J3-209	ENST00000504157	HEPH	Q9BQS7	1158 aa		18.47	■□□□□ 0.55

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