RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 SOBPA7XYQ1 873 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 PDE2AO00408 941 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 MUSKO15146 869 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 S100A6P06703 90 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 PIM1P11309 404 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 HSD17B2P37059 387 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 VPS41P49754 854 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 ATN1P54259 1190 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 KLHL30Q0D2K2 578 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 CYP4A22Q5TCH4 519 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 PDXDC1Q6P996 788 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 CORO6Q6QEF8 472 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 DBX2Q6ZNG2 339 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 UNC13DQ70J99 1090 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 SFR1Q86XK3 245 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 IFNLR1Q8IU57 520 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 DAW1Q8N136 415 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 ANGPTL6Q8NI99 470 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 WNT8BQ93098 351 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 DNAJC19Q96DA6 116 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 C7orf25Q9BPX7 421 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 LRRC1Q9BTT6 524 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 TRIM9Q9C026 710 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 DCLRE1BQ9H816 532 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 PLGRKTQ9HBL7 147 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 CLIC5Q9NZA1 410 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 ZC3H7BQ9UGR2 993 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 FBXL5Q9UKA1 691 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 DOLKQ9UPQ8 538 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 CAPN6Q9Y6Q1 641 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 ZSCAN5BA6NJL1 495 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 CENPBD1B2RD01 187 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 TLR3O15455 904 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 CD53P19397 219 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 TBXAS1P24557 533 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 ARL2P36404 184 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 MLLT6P55198 1093 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 PPP2R2BQ00005 443 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 C2orf54Q08AI8 447 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 FAAP100Q0VG06 881 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 GIT2Q14161 759 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 PSMD6Q15008 389 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 KCNJ8Q15842 424 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 WDR72Q3MJ13 1102 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 IER5Q5VY09 327 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 EFCAB12Q6NXP0 572 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 ZNF572Q7Z3I7 529 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 NOP9Q86U38 636 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 KIAA0319LQ8IZA0 1049 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 PAGE5Q96GU1 130 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 TRPV6Q9H1D0 765 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 USP29Q9HBJ7 922 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 NEK6Q9HC98 313 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 ARMC1Q9NVT9 282 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 SAMD15Q9P1V8 674 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 TBX21Q9UL17 535 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 ERVK-11Q9UQG0 969 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 MYH11P35749 1972 aa9.98□□□□□ -0.81
PDLIM5-207ENST00000503974 GOLGA8MH3BSY2 632 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 HDAC3O15379 428 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 KRT75O95678 551 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 POLR2CP19387 275 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 FECHP22830 423 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 ADSLP30566 484 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 PCYT1AP49585 367 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 CLCN3P51790 818 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 MDM2Q00987 491 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 PLCB3Q01970 1234 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 MYL5Q02045 173 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 TLE2Q04725 743 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 CETN1Q12798 172 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 LPIN1Q14693 890 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 SF3B4Q15427 424 aaKnown RBP eCLIP9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 MMAAQ8IVH4 418 aaKnown RBP9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 LRRC71Q8N4P6 559 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 CAGE1Q8TC20 777 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 LRRC8CQ8TDW0 803 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 TBC1D20Q96BZ9 403 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 TMA16Q96EY4 203 aaKnown RBP9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 REEP2Q9BRK0 252 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 CNOT10Q9H9A5 744 aaKnown RBP9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 C17orf75Q9HAS0 396 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 FARSBQ9NSD9 589 aaKnown RBP9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 DDX18Q9NVP1 670 aaKnown RBP9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 LTBP2Q14767 1821 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 DCDC2CA8MYV0 355 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 PITPNM1O00562 1244 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 GTPBP6O43824 516 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 PQBP1O60828 265 aaKnown RBP9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 SRGAP2O75044 1071 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 ATP1A1P05023 1023 aaKnown RBP9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 MYZAPP0CAP1 466 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 HOXB1P14653 301 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 SLC1A1P43005 524 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 CHRNEQ04844 493 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 POU5F1BQ06416 359 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 EHHADHQ08426 723 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 MGAT3Q09327 533 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 FAM26DQ5JW98 314 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 TRAF7Q6Q0C0 670 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms