RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 RTN4RL1Q86UN2 441 aaPredicted RBP22.25■■□□□ 1.15
UBE2D3-216ENST00000503742 UROC1Q96N76 676 aa22.25■■□□□ 1.15
UBE2D3-216ENST00000503742 SHOC2Q9UQ13 582 aa22.25■■□□□ 1.15
UBE2D3-216ENST00000503742 ERICH4A6NGS2 130 aa22.24■■□□□ 1.15
UBE2D3-216ENST00000503742 TGM2P21980 687 aa22.24■■□□□ 1.15
UBE2D3-216ENST00000503742 RPL22P35268 128 aaKnown RBP22.24■■□□□ 1.15
UBE2D3-216ENST00000503742 YWHAZP63104 245 aaKnown RBP22.24■■□□□ 1.15
UBE2D3-216ENST00000503742 ARFGAP2Q8N6H7 521 aa22.24■■□□□ 1.15
UBE2D3-216ENST00000503742 ZMIZ2Q8NF64 920 aa22.24■■□□□ 1.15
UBE2D3-216ENST00000503742 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.24■■□□□ 1.15
UBE2D3-216ENST00000503742 RBM15Q96T37 977 aaKnown RBP eCLIP22.24■■□□□ 1.152e-7■■■□□ 16.3
UBE2D3-216ENST00000503742 HMX1Q9NP08 348 aaPredicted RBP22.24■■□□□ 1.15
UBE2D3-216ENST00000503742 MTMR10Q9NXD2 777 aa22.24■■□□□ 1.15
UBE2D3-216ENST00000503742 C9IYK1 514 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 I3L4J1 428 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 AP1G2O75843 785 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 IBSPP21815 317 aaPredicted RBP22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 BRCC3P46736 316 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 APLP1P51693 650 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 TKTL1P51854 596 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 MAGOHP61326 146 aaKnown RBP22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 TNFAIP8L3Q5GJ75 292 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 RAB41Q5JT25 222 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 OTUD1Q5VV17 481 aaPredicted RBP22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 PCGF5Q86SE9 256 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 SLAIN1Q8ND83 568 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 PRCCQ92733 491 aaPredicted RBP22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 SLC2A13Q96QE2 648 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 TMEM30AQ9NV96 361 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 INPP5FQ9Y2H2 1132 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 APOL1O14791 398 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 STIP1P31948 543 aaKnown RBP22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 HPDP32754 393 aaPredicted RBP22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 NOS2P35228 1153 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 GNGT1P63211 74 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 MFSD5Q6N075 450 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 FAM171BQ6P995 826 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 LRRC31Q6UY01 552 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 LEKR1Q6ZMV7 388 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 SIX6OS1Q8N1H7 587 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 CCDC185Q8N715 623 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 EPS8L3Q8TE67 593 aaKnown RBP22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 FAM149B1Q96BN6 582 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 NPY6RQ99463 290 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 ACBD6Q9BR61 282 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 SLC12A6Q9UHW9 1150 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 AP4E1Q9UPM8 1137 aa22.23■■□□□ 1.15
UBE2D3-216ENST00000503742 RASGRF2O14827 1237 aa22.22■■□□□ 1.15
UBE2D3-216ENST00000503742 FBXO21O94952 628 aa22.22■■□□□ 1.15
UBE2D3-216ENST00000503742 EOMESO95936 686 aa22.22■■□□□ 1.15
UBE2D3-216ENST00000503742 SULT1E1P49888 294 aa22.22■■□□□ 1.15
UBE2D3-216ENST00000503742 CDR1P51861 262 aa22.22■■□□□ 1.15
UBE2D3-216ENST00000503742 CACNA2D1P54289 1103 aa22.22■■□□□ 1.15
UBE2D3-216ENST00000503742 PPP2R2AP63151 447 aa22.22■■□□□ 1.15
UBE2D3-216ENST00000503742 ROR1Q01973 937 aa22.22■■□□□ 1.15
UBE2D3-216ENST00000503742 PAN2Q504Q3 1202 aaKnown RBP22.22■■□□□ 1.15
UBE2D3-216ENST00000503742 FAM71DQ8N9W8 422 aa22.22■■□□□ 1.15
UBE2D3-216ENST00000503742 LINC01599Q8WXQ3 324 aa22.22■■□□□ 1.15
UBE2D3-216ENST00000503742 STARD7Q9NQZ5 370 aa22.22■■□□□ 1.15
UBE2D3-216ENST00000503742 DSEQ9UL01 958 aa22.22■■□□□ 1.15
UBE2D3-216ENST00000503742 TLDC2A0PJX2 215 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 HHLA1C9JL84 531 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 EIF3HO15372 352 aaKnown RBP eCLIP22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 TCEA3O75764 348 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 MAGEA4P43358 317 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 CTCFP49711 727 aaPredicted RBP22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 BCAR1P56945 870 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 FAM189BP81408 668 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 DCAF6Q58WW2 860 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 PPP6R3Q5H9R7 873 aaPredicted RBP22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 C1orf228Q6PIY5 440 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 DCLRE1AQ6PJP8 1040 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 RSPH1Q8WYR4 309 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 CPT1BQ92523 772 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 KCNK16Q96T55 309 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 PKMYT1Q99640 499 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 ULBP1Q9BZM6 244 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 DHX35Q9H5Z1 703 aaKnown RBP22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 NRDE2Q9H7Z3 1164 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 CSNK1G1Q9HCP0 422 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 NRP1O14786 923 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 RGS16O15492 202 aaPredicted RBP22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 CYP2F1P24903 491 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 MDH1P40925 334 aaKnown RBP22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 DAOAP59103 153 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 AUHQ13825 339 aaKnown RBP22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 INTS6LQ5JSJ4 861 aaKnown RBP22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 TTC19Q6DKK2 380 aaPredicted RBP22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 DARS2Q6PI48 645 aaKnown RBP22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 HFE2Q6ZVN8 426 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 SLC24A5Q71RS6 500 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 GPRIN1Q7Z2K8 1008 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 ZC3H18Q86VM9 953 aaKnown RBP22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 METTL23Q86XA0 190 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 PSTKQ8IV42 348 aaKnown RBP22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 PPIL6Q8IXY8 311 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 NAT8LQ8N9F0 302 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 SMARCD1Q96GM5 515 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 KCTD15Q96SI1 283 aaPredicted RBP22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 MAGEB5Q9BZ81 275 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms