RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CFAP45Q9UL16 551 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 SCML2Q9UQR0 700 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 TRAF3IP3Q9Y228 551 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 SLC27A6Q9Y2P4 619 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 MSRB2Q9Y3D2 182 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 USP3Q9Y6I4 520 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 ADAMTS9Q9P2N4 1935 aa6.46□□□□□ -1.38
LSM3P4-201ENST00000502948 CFAP47Q6ZTR5 3102 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 TBC1D3BA6NDS4 549 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 LRRIQ3A6PVS8 624 aaPredicted RBP6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 PATE3B3GLJ2 98 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 HHLA1C9JL84 531 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 ARHGAP33O14559 1287 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 CLIC2O15247 247 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 POLR2DO15514 142 aaKnown RBP6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 ZBTB24O43167 697 aaPredicted RBP6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 MAP3K13O43283 966 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 TLR5O60602 858 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 PHACTR2O75167 634 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 GJB3O75712 270 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 IGLV3-19P01714 112 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 CENPBP07199 599 aaPredicted RBP6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 SYPP08247 313 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 SLFN14P0C7P3 912 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 ZNF883P0CG24 379 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 ENGP17813 658 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 GABRG2P18507 467 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 ACO1P21399 889 aaKnown RBP6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 TIE1P35590 1138 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 CHKAP35790 457 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 PTGER3P43115 390 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 PLA2G4AP47712 749 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 CYP2J2P51589 502 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 CDR1P51861 262 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 GFPT1Q06210 699 aaPredicted RBP6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 ZNF33AQ06730 810 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 MESP2Q0VG99 397 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 NCOA4Q13772 614 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 EIF4HQ15056 248 aaKnown RBP6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 ZNF423Q2M1K9 1284 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 GRAMD4Q6IC98 578 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 Q6ZNB5 142 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 DBX2Q6ZNG2 339 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 CLEC20AQ6ZU45 233 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 GLRX5Q86SX6 157 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 BBS7Q8IWZ6 715 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 CCDC33Q8N5R6 958 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 RDH13Q8NBN7 331 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 ZMIZ2Q8NF64 920 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 CADM4Q8NFZ8 388 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 SCAMP5Q8TAC9 235 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 PLEKHO2Q8TD55 490 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 DNASE2BQ8WZ79 361 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 PIGKQ92643 395 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 FOXJ1Q92949 421 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 HPS3Q969F9 1004 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 DHX58Q96C10 678 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 SMOQ99835 787 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 PCED1AQ9H1Q7 454 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 KCTD10Q9H3F6 313 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 CCSER2Q9H7U1 834 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 KRT82Q9NSB4 513 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 SMPD4Q9NXE4 827 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 NXF1Q9UBU9 619 aaKnown RBP6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 CHORDC1Q9UHD1 332 aaPredicted RBP6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 LSM7Q9UK45 103 aaKnown RBP6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 HCN2Q9UL51 889 aa6.45□□□□□ -1.38
LSM3P4-201ENST00000502948 ASPMQ8IZT6 3477 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 WDFY3Q8IZQ1 3526 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 IGHV1OR15-9A0A0B4J2B8 117 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 FAM237AA0A1B0GTK4 181 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 TCRBV21S2A2A0A5A6 115 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 CLDN5O00501 218 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 GIPC1O14908 333 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 TIMM44O43615 452 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 KLRC4O43908 158 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 AP1G2O75843 785 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 VNN1O95497 513 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 ABL1P00519 1130 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 PENKP01210 267 aaPredicted RBP6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 CAPNS1P04632 268 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 CISD3P0C7P0 127 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 FAM200BP0CF97 657 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 HOXB2P14652 356 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 TYRP14679 529 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 GTF2H1P32780 548 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 ASPAP45381 313 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 KIF11P52732 1056 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 CDH8P55286 799 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 SEC13P55735 322 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 ZNF445P59923 1031 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 COG7P83436 770 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 RPL6Q02878 288 aaKnown RBP6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 STK4Q13043 487 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 BIRC3Q13489 604 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 ANO4Q32M45 955 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 WDR45BQ5MNZ6 344 aa6.44□□□□□ -1.38
LSM3P4-201ENST00000502948 C10orf76Q5T2E6 689 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms