RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 CSPG5O95196 566 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 SERPINA6P08185 405 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 ADORA2BP29275 332 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 KRT72Q14CN4 511 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 CDRT15Q96T59 188 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 DCUN1D5Q9BTE7 237 aa17.76■□□□□ 0.43
HMGXB3-201ENST00000502717 FMN2Q9NZ56 1722 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 PRKCEQ02156 737 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 LRRC38Q5VT99 294 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 PPP1R16BQ96T49 567 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 RRN3Q9NYV6 651 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 AK5Q9Y6K8 562 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 HEATR9A2RTY3 570 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 FAM86B1E9PN63 330 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 BCL10O95999 233 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 FAM86B2P0C5J1 330 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 TTKP33981 857 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 TPI1P60174 286 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 DAB2P98082 770 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 NSUN2Q08J23 767 aaKnown RBP eCLIP17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 BST1Q10588 318 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 TTLL4Q14679 1199 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 OTOP1Q7RTM1 612 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 LPAR1Q92633 364 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 USP13Q92995 863 aaPredicted RBP17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 LRRC39Q96DD0 335 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 L3MBTL3Q96JM7 780 aaPredicted RBP17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 ARHGEF38Q9NXL2 777 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 C6orf203Q9P0P8 240 aaPredicted RBP17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 TMEM59LQ9UK28 342 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 CPSF3Q9UKF6 684 aaKnown RBP17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 MTSS1O43312 755 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 MAGEC1O60732 1142 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 FCGR1AP12314 374 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 LCP1P13796 627 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 RBP5P82980 135 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 MGAT5Q09328 741 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 C3orf67Q6ZVT6 689 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 C1orf186Q6ZWK4 172 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 KAT5Q92993 513 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 CGRRF1Q99675 332 aa17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 STN1Q9H668 368 aaKnown RBP17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 COPS7BQ9H9Q2 264 aaPredicted RBP17.75■□□□□ 0.43
HMGXB3-201ENST00000502717 MAGEB2O15479 319 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 GFAPP14136 432 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 ATICP31939 592 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 CDK7P50613 346 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 RNF139Q8WU17 664 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 CNPY3Q9BT09 278 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 IL1RL2Q9HB29 575 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 PIK3C2AO00443 1686 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 SPDYE16A6NNV3 312 aaPredicted RBP17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 IL18RAPO95256 599 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 DPEP1P16444 411 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 PTGIRP43119 386 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 ATP1A4Q13733 1029 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 MXD4Q14582 209 aaPredicted RBP17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 SPDYE2Q495Y8 402 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 ZNF606Q8WXB4 792 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 VPS50Q96JG6 964 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 SCN3BQ9NY72 215 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 GRHL1Q9NZI5 618 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 ZNF70Q9UC06 446 aaPredicted RBP17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 NFAT5O94916 1531 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 ASB14A6NK59 587 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 CELF2O95319 508 aaKnown RBP17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 CCDC159P0C7I6 412 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 TGM2P21980 687 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 FMO1Q01740 532 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 FOLH1Q04609 750 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 KHDC1Q4VXA5 237 aaKnown RBP17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 XRRA1Q6P2D8 792 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 ARCQ7LC44 396 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 SHC3Q92529 594 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 EPAS1Q99814 870 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 NT5C1AQ9BXI3 368 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 FAM49AQ9H0Q0 323 aaPredicted RBP17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 LRRC40Q9H9A6 602 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 POLRMTO00411 1230 aaKnown RBP17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 EIF2B2P49770 351 aaKnown RBP17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 SULT1E1P49888 294 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 PRKAA1Q13131 559 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 CAPRIN1Q14444 709 aaKnown RBP17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 TMTC4Q5T4D3 741 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 ZCCHC23Q6ZST2 131 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 TSPAN14Q8NG11 270 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 SKA2Q8WVK7 121 aaPredicted RBP17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 CCDC126Q96EE4 140 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 GMCL1Q96IK5 515 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 ZDHHC18Q9NUE0 388 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 ATAD3AQ9NVI7 634 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 VTI1BQ9UEU0 232 aa17.74■□□□□ 0.43
HMGXB3-201ENST00000502717 CAMTA1Q9Y6Y1 1673 aa17.73■□□□□ 0.43
HMGXB3-201ENST00000502717 A0A1W2PPM1 405 aa17.73■□□□□ 0.43
HMGXB3-201ENST00000502717 SLC4A1P02730 911 aa17.73■□□□□ 0.43
HMGXB3-201ENST00000502717 PPATQ06203 517 aa17.73■□□□□ 0.43
HMGXB3-201ENST00000502717 DPYSL3Q14195 570 aa17.73■□□□□ 0.43
HMGXB3-201ENST00000502717 FRA10AC1Q70Z53 315 aa17.73■□□□□ 0.43
HMGXB3-201ENST00000502717 SLC8A2Q9UPR5 921 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms