RNA–Protein interactions for RNA: ENST00000502478.1

CCSER1-202, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 744 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-202ENST00000502478 THBS4P35443 961 aa5.19□□□□□ -1.58
CCSER1-202ENST00000502478 C4orf46Q504U0 113 aa5.19□□□□□ -1.58
CCSER1-202ENST00000502478 BRDTQ58F21 947 aaPredicted RBP5.19□□□□□ -1.58
CCSER1-202ENST00000502478 MEPCEQ7L2J0 689 aaKnown RBP5.19□□□□□ -1.58
CCSER1-202ENST00000502478 OSR1Q8TAX0 266 aaPredicted RBP5.19□□□□□ -1.58
CCSER1-202ENST00000502478 HPS3Q969F9 1004 aa5.19□□□□□ -1.58
CCSER1-202ENST00000502478 CCDC17Q96LX7 622 aa5.19□□□□□ -1.58
CCSER1-202ENST00000502478 CGRRF1Q99675 332 aa5.19□□□□□ -1.58
CCSER1-202ENST00000502478 C17orf80Q9BSJ5 609 aa5.19□□□□□ -1.58
CCSER1-202ENST00000502478 CNNM1Q9NRU3 951 aa5.19□□□□□ -1.58
CCSER1-202ENST00000502478 SHANK2Q9UPX8 1470 aa5.19□□□□□ -1.58
CCSER1-202ENST00000502478 CFAP65Q6ZU64 1925 aaKnown RBP5.19□□□□□ -1.58
CCSER1-202ENST00000502478 KANK1Q14678 1352 aa5.18□□□□□ -1.58
CCSER1-202ENST00000502478 ABCC5O15440 1437 aa5.18□□□□□ -1.58
CCSER1-202ENST00000502478 ABLIM3O94929 683 aa5.18□□□□□ -1.58
CCSER1-202ENST00000502478 MT-CO3P00414 261 aa5.18□□□□□ -1.58
CCSER1-202ENST00000502478 PHKG2P15735 406 aa5.18□□□□□ -1.58
CCSER1-202ENST00000502478 GKP32189 559 aa5.18□□□□□ -1.58
CCSER1-202ENST00000502478 THBS3P49746 956 aa5.18□□□□□ -1.58
CCSER1-202ENST00000502478 LEXMQ3ZCV2 418 aa5.18□□□□□ -1.58
CCSER1-202ENST00000502478 DEF8Q6ZN54 512 aa5.18□□□□□ -1.58
CCSER1-202ENST00000502478 DNAJC5GQ8N7S2 189 aa5.18□□□□□ -1.58
CCSER1-202ENST00000502478 MAP4K1Q92918 833 aa5.18□□□□□ -1.58
CCSER1-202ENST00000502478 SIGLEC11Q96RL6 698 aa5.18□□□□□ -1.58
CCSER1-202ENST00000502478 MAP3K14Q99558 947 aa5.18□□□□□ -1.58
CCSER1-202ENST00000502478 NUP88Q99567 741 aaPredicted RBP5.18□□□□□ -1.58
CCSER1-202ENST00000502478 P2RX7Q99572 595 aaKnown RBP5.18□□□□□ -1.58
CCSER1-202ENST00000502478 ARMT1Q9H993 441 aa5.18□□□□□ -1.58
CCSER1-202ENST00000502478 PIH1D1Q9NWS0 290 aaKnown RBP5.18□□□□□ -1.58
CCSER1-202ENST00000502478 PI4KBQ9UBF8 816 aa5.18□□□□□ -1.58
CCSER1-202ENST00000502478 CPA4Q9UI42 421 aa5.18□□□□□ -1.58
CCSER1-202ENST00000502478 LUC7L2Q9Y383 392 aaKnown RBP5.18□□□□□ -1.58
CCSER1-202ENST00000502478 EID1Q9Y6B2 187 aa5.18□□□□□ -1.58
CCSER1-202ENST00000502478 ERVK-7P63135 1459 aa5.18□□□□□ -1.58
CCSER1-202ENST00000502478 NLRP1Q9C000 1473 aa5.18□□□□□ -1.58
CCSER1-202ENST00000502478 ZMYM2Q9UBW7 1377 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 CEP152O94986 1710 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 NEURL4Q96JN8 1562 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 DAPK1P53355 1430 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 FGD6Q6ZV73 1430 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 PTPN23Q9H3S7 1636 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 PRR23D1E9PI22 279 aaPredicted RBP5.17□□□□□ -1.58
CCSER1-202ENST00000502478 PMPCBO75439 489 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 RNF8O76064 485 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 PRR23D2P0DMB1 279 aaPredicted RBP5.17□□□□□ -1.58
CCSER1-202ENST00000502478 VCAM1P19320 739 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 ARFIP2P53365 341 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 PRKAG1P54619 331 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 SUMO2P61956 95 aaKnown RBP5.17□□□□□ -1.58
CCSER1-202ENST00000502478 RAB1AP62820 205 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 MLC1Q15049 377 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 ATAT1Q5SQI0 421 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 CERCAMQ5T4B2 595 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 KIAA1161Q6NSJ0 714 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 SLC15A4Q8N697 577 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 LINC01465Q8N7H1 131 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 BPIFB1Q8TDL5 484 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 TMEM171Q8WVE6 324 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 FOXP1Q9H334 677 aaPredicted RBP5.17□□□□□ -1.58
CCSER1-202ENST00000502478 TCF7L1Q9HCS4 588 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 IQSEC2Q5JU85 1478 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 DUOX2Q9NRD8 1548 aa5.17□□□□□ -1.58
CCSER1-202ENST00000502478 ANKRD30AQ9BXX3 1397 aa5.16□□□□□ -1.58
CCSER1-202ENST00000502478 CD8B2A6NJW9 211 aa5.16□□□□□ -1.58
CCSER1-202ENST00000502478 M0R3H8 397 aa5.16□□□□□ -1.58
CCSER1-202ENST00000502478 PSMD9O00233 223 aa5.16□□□□□ -1.58
CCSER1-202ENST00000502478 CES2O00748 559 aa5.16□□□□□ -1.58
CCSER1-202ENST00000502478 CNOT3O75175 753 aaKnown RBP5.16□□□□□ -1.58
CCSER1-202ENST00000502478 APEHP13798 732 aaKnown RBP5.16□□□□□ -1.58
CCSER1-202ENST00000502478 LMAN2Q12907 356 aa5.16□□□□□ -1.58
CCSER1-202ENST00000502478 IDI1Q13907 227 aa5.16□□□□□ -1.58
CCSER1-202ENST00000502478 FGL2Q14314 439 aa5.16□□□□□ -1.58
CCSER1-202ENST00000502478 LARS2Q15031 903 aaKnown RBP5.16□□□□□ -1.58
CCSER1-202ENST00000502478 PLA1AQ53H76 456 aa5.16□□□□□ -1.58
CCSER1-202ENST00000502478 AWAT1Q58HT5 328 aa5.16□□□□□ -1.58
CCSER1-202ENST00000502478 LMBRD2Q68DH5 695 aaPredicted RBP5.16□□□□□ -1.58
CCSER1-202ENST00000502478 C9orf47Q6ZRZ4 202 aa5.16□□□□□ -1.58
CCSER1-202ENST00000502478 PTCHD4Q6ZW05 846 aa5.16□□□□□ -1.58
CCSER1-202ENST00000502478 LIX1LQ8IVB5 337 aa5.16□□□□□ -1.58
CCSER1-202ENST00000502478 KBTBD7Q8WVZ9 684 aa5.16□□□□□ -1.58
CCSER1-202ENST00000502478 CHMP4CQ96CF2 233 aa5.16□□□□□ -1.58
CCSER1-202ENST00000502478 TRIM54Q9BYV2 358 aa5.16□□□□□ -1.58
CCSER1-202ENST00000502478 WWOXQ9NZC7 414 aa5.16□□□□□ -1.58
CCSER1-202ENST00000502478 POLR1AO95602 1720 aaPredicted RBP5.16□□□□□ -1.58
CCSER1-202ENST00000502478 CPS1P31327 1500 aa5.16□□□□□ -1.58
CCSER1-202ENST00000502478 MAST1Q9Y2H9 1570 aa5.16□□□□□ -1.58
CCSER1-202ENST00000502478 RNF17Q9BXT8 1623 aaKnown RBP5.15□□□□□ -1.58
CCSER1-202ENST00000502478 SCAF11Q99590 1463 aaKnown RBP5.15□□□□□ -1.58
CCSER1-202ENST00000502478 MAP3K1Q13233 1512 aa5.15□□□□□ -1.58
CCSER1-202ENST00000502478 A0A088AWK7 358 aa5.15□□□□□ -1.59
CCSER1-202ENST00000502478 TLR2O60603 784 aa5.15□□□□□ -1.59
CCSER1-202ENST00000502478 TOMM40O96008 361 aa5.15□□□□□ -1.59
CCSER1-202ENST00000502478 ALPLP05186 524 aa5.15□□□□□ -1.59
CCSER1-202ENST00000502478 CFHR1Q03591 330 aa5.15□□□□□ -1.59
CCSER1-202ENST00000502478 ZNF91Q05481 1191 aa5.15□□□□□ -1.59
CCSER1-202ENST00000502478 SEC23BQ15437 767 aa5.15□□□□□ -1.59
CCSER1-202ENST00000502478 PLEKHG6Q3KR16 790 aa5.15□□□□□ -1.59
CCSER1-202ENST00000502478 TMEM63BQ5T3F8 832 aa5.15□□□□□ -1.59
CCSER1-202ENST00000502478 ZBTB46Q86UZ6 589 aa5.15□□□□□ -1.59
CCSER1-202ENST00000502478 RAB11FIP4Q86YS3 637 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms