RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 SYN2Q92777 582 aaPredicted RBP16.32■□□□□ 0.2
CPNE1-228ENST00000498814 EDAQ92838 391 aa16.32■□□□□ 0.2
CPNE1-228ENST00000498814 AGPAT1Q99943 283 aa16.32■□□□□ 0.2
CPNE1-228ENST00000498814 TRIM5Q9C035 493 aa16.32■□□□□ 0.2
CPNE1-228ENST00000498814 NACA2Q9H009 215 aa16.32■□□□□ 0.2
CPNE1-228ENST00000498814 MIS12Q9H081 205 aa16.32■□□□□ 0.2
CPNE1-228ENST00000498814 SMOC2Q9H3U7 446 aa16.32■□□□□ 0.2
CPNE1-228ENST00000498814 ABCC13Q9NSE7 274 aa16.32■□□□□ 0.2
CPNE1-228ENST00000498814 THG1LQ9NWX6 298 aaKnown RBP16.32■□□□□ 0.2
CPNE1-228ENST00000498814 LUC7L2Q9Y383 392 aaKnown RBP16.32■□□□□ 0.2
CPNE1-228ENST00000498814 CPQQ9Y646 472 aa16.32■□□□□ 0.2
CPNE1-228ENST00000498814 TICRRQ7Z2Z1 1910 aa16.31■□□□□ 0.2
CPNE1-228ENST00000498814 CHADO15335 359 aa16.31■□□□□ 0.2
CPNE1-228ENST00000498814 TBX18O95935 607 aa16.31■□□□□ 0.2
CPNE1-228ENST00000498814 LTFP02788 710 aa16.31■□□□□ 0.2
CPNE1-228ENST00000498814 GABRB2P47870 512 aa16.31■□□□□ 0.2
CPNE1-228ENST00000498814 ZXDBP98169 803 aa16.31■□□□□ 0.2
CPNE1-228ENST00000498814 TRIM14Q14142 442 aa16.31■□□□□ 0.2
CPNE1-228ENST00000498814 GRM2Q14416 872 aa16.31■□□□□ 0.2
CPNE1-228ENST00000498814 PTPN20Q4JDL3 420 aa16.31■□□□□ 0.2
CPNE1-228ENST00000498814 ARHGAP29Q52LW3 1261 aa16.31■□□□□ 0.2
CPNE1-228ENST00000498814 C10orf120Q5SQS8 335 aa16.31■□□□□ 0.2
CPNE1-228ENST00000498814 E4F1Q66K89 784 aaPredicted RBP16.31■□□□□ 0.2
CPNE1-228ENST00000498814 DDX42Q86XP3 938 aaKnown RBP eCLIP16.31■□□□□ 0.2
CPNE1-228ENST00000498814 YAF2Q8IY57 180 aa16.31■□□□□ 0.2
CPNE1-228ENST00000498814 RIN3Q8TB24 985 aa16.31■□□□□ 0.2
CPNE1-228ENST00000498814 IPO4Q8TEX9 1081 aaKnown RBP16.31■□□□□ 0.2
CPNE1-228ENST00000498814 CLEC4CQ8WTT0 213 aa16.31■□□□□ 0.2
CPNE1-228ENST00000498814 CPLX3Q8WVH0 158 aa16.31■□□□□ 0.2
CPNE1-228ENST00000498814 GOLGA1Q92805 767 aa16.31■□□□□ 0.2
CPNE1-228ENST00000498814 ZFRQ96KR1 1074 aaKnown RBP16.31■□□□□ 0.2
CPNE1-228ENST00000498814 SYT11Q9BT88 431 aa16.31■□□□□ 0.2
CPNE1-228ENST00000498814 OLA1Q9NTK5 396 aaKnown RBP16.31■□□□□ 0.2
CPNE1-228ENST00000498814 TJP2Q9UDY2 1190 aa16.31■□□□□ 0.2
CPNE1-228ENST00000498814 DNMT3LQ9UJW3 386 aa16.31■□□□□ 0.2
CPNE1-228ENST00000498814 LEFTY2O00292 366 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 ZNF263O14978 683 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 ERBB2P04626 1255 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 GDI1P31150 447 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 CASP14P31944 242 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 PFKPQ01813 784 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 MTF1Q14872 753 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 NAA35Q5VZE5 725 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 HFE2Q6ZVN8 426 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 RSRC2Q7L4I2 434 aaKnown RBP16.3■□□□□ 0.2
CPNE1-228ENST00000498814 BEND5Q7L4P6 421 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 ERICH1Q86X53 443 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 ZDHHC17Q8IUH5 632 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 MSANTD4Q8NCY6 345 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 CPA5Q8WXQ8 436 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 DNASE1L2Q92874 299 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 IRF7Q92985 503 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 PCDHB18PQ96TA0 734 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 TRIM62Q9BVG3 475 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 KLF16Q9BXK1 252 aaPredicted RBP16.3■□□□□ 0.2
CPNE1-228ENST00000498814 SYNCQ9H7C4 482 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 BRD9Q9H8M2 597 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 TRPV5Q9NQA5 729 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 SMPD4Q9NXE4 827 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 NUDT5Q9UKK9 219 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 COL4A2P08572 1712 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 TECTAO75443 2155 aa16.3■□□□□ 0.2
CPNE1-228ENST00000498814 DLL1O00548 723 aa16.29■□□□□ 0.2
CPNE1-228ENST00000498814 GLI1P08151 1106 aa16.29■□□□□ 0.2
CPNE1-228ENST00000498814 UNGP13051 313 aaPredicted RBP16.29■□□□□ 0.2
CPNE1-228ENST00000498814 SIGLEC14Q08ET2 396 aa16.29■□□□□ 0.2
CPNE1-228ENST00000498814 KLHL30Q0D2K2 578 aa16.29■□□□□ 0.2
CPNE1-228ENST00000498814 CLEC16AQ2KHT3 1053 aa16.29■□□□□ 0.2
CPNE1-228ENST00000498814 CC2D1AQ6P1N0 951 aaPredicted RBP16.29■□□□□ 0.2
CPNE1-228ENST00000498814 RNF139Q8WU17 664 aa16.29■□□□□ 0.2
CPNE1-228ENST00000498814 EDEM1Q92611 657 aa16.29■□□□□ 0.2
CPNE1-228ENST00000498814 C18orf8Q96DM3 657 aa16.29■□□□□ 0.2
CPNE1-228ENST00000498814 FAM83CQ9BQN1 747 aa16.29■□□□□ 0.2
CPNE1-228ENST00000498814 HAUS4Q9H6D7 363 aa16.29■□□□□ 0.2
CPNE1-228ENST00000498814 GKN1Q9NS71 199 aa16.29■□□□□ 0.2
CPNE1-228ENST00000498814 ASNSD1Q9NWL6 643 aa16.29■□□□□ 0.2
CPNE1-228ENST00000498814 CFAP97Q9P2B7 532 aa16.29■□□□□ 0.2
CPNE1-228ENST00000498814 WNT16Q9UBV4 365 aa16.29■□□□□ 0.2
CPNE1-228ENST00000498814 BZW2Q9Y6E2 419 aaKnown RBP16.29■□□□□ 0.2
CPNE1-228ENST00000498814 E2F8A0AVK6 867 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 ARNTLO00327 626 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 MDM4O15151 490 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 FYNP06241 537 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 TNFAIP3P21580 790 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 MMP8P22894 467 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 HNRNPH3P31942 346 aaKnown RBP16.28■□□□□ 0.2
CPNE1-228ENST00000498814 ZNF75DP51815 510 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 YWHAZP63104 245 aaKnown RBP16.28■□□□□ 0.2
CPNE1-228ENST00000498814 SLC6A3Q01959 620 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 CENPCQ03188 943 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 EFEMP1Q12805 493 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 EFHC1Q5JVL4 640 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 HGSNATQ68CP4 663 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 OR6B2Q6IFH4 312 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 MSANTD2Q6P1R3 559 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 OLFML1Q6UWY5 402 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 TRIM67Q6ZTA4 783 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 TOGARAM2Q6ZUX3 1019 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 FAM183BPQ6ZVS7 135 aa16.28■□□□□ 0.2
CPNE1-228ENST00000498814 ZNF571Q7Z3V5 609 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms