RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 DNMT3AQ9Y6K1 912 aaPredicted RBP6.01□□□□□ -1.45
SOX2-OT-218ENST00000498731 H3BUI4 141 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 WDR46O15213 610 aaKnown RBP6□□□□□ -1.45
SOX2-OT-218ENST00000498731 CIITAP33076 1130 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 NOS2P35228 1153 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 NT5C2P49902 561 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 MAPK10P53779 464 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 FOLH1Q04609 750 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 NR1D2Q14995 579 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 SEPT7Q16181 437 aaKnown RBP6□□□□□ -1.45
SOX2-OT-218ENST00000498731 COL24A1Q17RW2 1714 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 ZNF568Q3ZCX4 644 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 WDR45BQ5MNZ6 344 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 DCAF15Q66K64 600 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 GJB7Q6PEY0 223 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 CLIP4Q8N3C7 705 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 PTCD2Q8WV60 388 aaKnown RBP6□□□□□ -1.45
SOX2-OT-218ENST00000498731 IRGQQ8WZA9 623 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 TANKQ92844 425 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 STMN2Q93045 179 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 FAM118BQ9BPY3 351 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 MRIQ9BWK5 157 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 XPNPEP1Q9NQW7 623 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 BLOC1S4Q9NUP1 217 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 GPRC5DQ9NZD1 345 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 NCKIPSDQ9NZQ3 722 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 A0A1W2PPM1 405 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 A0A1W2PQJ5 194 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 ARHGEF35A5YM69 484 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 PABPN1LA6NDY0 278 aaKnown RBP6□□□□□ -1.45
SOX2-OT-218ENST00000498731 H3BRJ5 948 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 RBAK-RBAKDNI3L0D1 243 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 MAPK13O15264 365 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 MSH4O15457 936 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 CLPTM1O96005 669 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 CYP1A2P05177 515 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 OCM2P0CE71 109 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 OCMP0CE72 109 aaPredicted RBP6□□□□□ -1.45
SOX2-OT-218ENST00000498731 CCNE1P24864 410 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 GABRB3P28472 473 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 PMLP29590 882 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 NR4A2P43354 598 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 CDH15P55291 814 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 KCNH2Q12809 1159 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 COASYQ13057 564 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 MIER3Q7Z3K6 550 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 KIAA0907Q7Z7F0 614 aaPredicted RBP6□□□□□ -1.45
SOX2-OT-218ENST00000498731 NT5DC3Q86UY8 548 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 SFR1Q86XK3 245 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 CATSPER3Q86XQ3 398 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 SLFN12Q8IYM2 578 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 OR8H2Q8N162 312 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 PIP4P2Q8N4L2 257 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 TEX19Q8NA77 164 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 PLPP7Q8NBV4 271 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 RBM15BQ8NDT2 890 aaKnown RBP6□□□□□ -1.45
SOX2-OT-218ENST00000498731 EXD1Q8NHP7 514 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 TPCN2Q8NHX9 752 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 PLEKHO2Q8TD55 490 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 BRSK1Q8TDC3 778 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 KRT35Q92764 455 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 GMCL1Q96IK5 515 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 CNBD2Q96M20 576 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 EIF2AQ9BY44 585 aaKnown RBP6□□□□□ -1.45
SOX2-OT-218ENST00000498731 SHCBP1LQ9BZQ2 653 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 KCNK13Q9HB14 408 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 NEUROD4Q9HD90 331 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 WDR6Q9NNW5 1121 aaKnown RBP6□□□□□ -1.45
SOX2-OT-218ENST00000498731 VTA1Q9NP79 307 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 SEPT11Q9NVA2 429 aaKnown RBP6□□□□□ -1.45
SOX2-OT-218ENST00000498731 KBTBD4Q9NVX7 518 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 NAALADL1Q9UQQ1 740 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 BPTFQ12830 3046 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 KAT6AQ92794 2004 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 TMEM150BA6NC51 233 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 ADM5C9JUS6 153 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 EML1O00423 815 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 AQP9O43315 295 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 ENO2P09104 434 aaPredicted RBP6□□□□□ -1.45
SOX2-OT-218ENST00000498731 KRT13P13646 458 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 UQCRBP14927 111 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 GCAP28676 217 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 CCT8P50990 548 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 CYP2J2P51589 502 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 CHN2P52757 468 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 FKBP1AP62942 108 aaKnown RBP6□□□□□ -1.45
SOX2-OT-218ENST00000498731 CDKL1Q00532 357 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 MTM1Q13496 603 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 MED21Q13503 144 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 BAATQ14032 418 aaPredicted RBP6□□□□□ -1.45
SOX2-OT-218ENST00000498731 ZNF423Q2M1K9 1284 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 MMEL1Q495T6 779 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 PPP6R3Q5H9R7 873 aaPredicted RBP6□□□□□ -1.45
SOX2-OT-218ENST00000498731 TMTC4Q5T4D3 741 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 CYP4F22Q6NT55 531 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 LRRC6Q86X45 466 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 GRAMD2AQ8IUY3 354 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 OTUD5Q96G74 571 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 HES6Q96HZ4 224 aa6□□□□□ -1.45
SOX2-OT-218ENST00000498731 FAR2Q96K12 515 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms